Gene : Sobic.003G034100 S. bicolor v3.1.1
Defline:  weakly similar to H0207B04.9 protein Genomic Order:  355
Name:  ? Sobic.003G034100 Secondary Identifier:  ? PAC:37913457
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G034100 0.5kb upstream 0.5kb upstream 5692 true Chr03: 3112908-3118599 Sorghum bicolor
Sobic.003G034100 0.5kb upstream 0.5kb upstream 500 false Chr03: 3118100-3118599 Sorghum bicolor
Sobic.003G034100 0.5kb downstream 0.5kb downstream 5692 true Chr03: 3112408-3118099 Sorghum bicolor
Sobic.003G034100 0.5kb downstream 0.5kb downstream 500 false Chr03: 3112408-3112907 Sorghum bicolor
Sobic.003G034100 1.0kb upstream 1.0kb upstream 6192 true Chr03: 3112908-3119099 Sorghum bicolor
Sobic.003G034100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3118100-3119099 Sorghum bicolor
Sobic.003G034100 1.0kb downstream 1.0kb downstream 6192 true Chr03: 3111908-3118099 Sorghum bicolor
Sobic.003G034100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3111908-3112907 Sorghum bicolor
Sobic.003G034100 2.0kb upstream 2.0kb upstream 7192 true Chr03: 3112908-3120099 Sorghum bicolor
Sobic.003G034100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3118100-3120099 Sorghum bicolor
Sobic.003G034100 2.0kb downstream 2.0kb downstream 7192 true Chr03: 3110908-3118099 Sorghum bicolor
Sobic.003G034100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3110908-3112907 Sorghum bicolor
Sobic.003G034100 5.0kb upstream 5.0kb upstream 10192 true Chr03: 3112908-3123099 Sorghum bicolor
Sobic.003G034100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3118100-3123099 Sorghum bicolor
Sobic.003G034100 5.0kb downstream 5.0kb downstream 10192 true Chr03: 3107908-3118099 Sorghum bicolor
Sobic.003G034100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3107908-3112907 Sorghum bicolor
Sobic.003G034100 10.0kb upstream 10.0kb upstream 15192 true Chr03: 3112908-3128099 Sorghum bicolor
Sobic.003G034100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3118100-3128099 Sorghum bicolor
Sobic.003G034100 10.0kb downstream 10.0kb downstream 15192 true Chr03: 3102908-3118099 Sorghum bicolor
Sobic.003G034100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3102908-3112907 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187505 5267 Panicoideae View MSA
124589321 5269 Grass View MSA
122047772 5273 Angiosperm View MSA
121310791 5274 Embryophyte View MSA
123348191 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.497        
cufflinks 0.965       Low
cufflinks 1.126       Low
cufflinks 1.092       Low
cufflinks 5.242       High
cufflinks 3.244        
cufflinks 5.047       High
cufflinks 1.635        
cufflinks 2.366        
cufflinks 3.063        
cufflinks 2.882        
cufflinks 2.927        
cufflinks 3.44        
cufflinks 2.409        
cufflinks 3.326        
cufflinks 1.717        
cufflinks 5.199       High
cufflinks 5.592       High
cufflinks 2.989        
cufflinks 4.599        
cufflinks 11.498       High
cufflinks 3.076        
cufflinks 2.916        
cufflinks 3.094        
cufflinks 1.139       Low
cufflinks 0.668       Low
cufflinks 1.41       Low
cufflinks 0.95       Low
cufflinks 3.171        
cufflinks 4.227        

0 Strain