Gene : Sobic.003G034900 S. bicolor v3.1.1
Defline:  (1 of 2) 3.4.24.64 - Mitochondrial processing peptidase / Processing enhancing peptidase Genomic Order:  365
Name:  ? Sobic.003G034900 Secondary Identifier:  ? PAC:37915903
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-3781 Sorghum bicolor pathologic  
Sbicolor PWY-7279 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G034900 0.5kb upstream 0.5kb upstream 5565 true Chr03: 3195611-3201175 Sorghum bicolor
Sobic.003G034900 0.5kb upstream 0.5kb upstream 500 false Chr03: 3200676-3201175 Sorghum bicolor
Sobic.003G034900 0.5kb downstream 0.5kb downstream 5565 true Chr03: 3195111-3200675 Sorghum bicolor
Sobic.003G034900 0.5kb downstream 0.5kb downstream 500 false Chr03: 3195111-3195610 Sorghum bicolor
Sobic.003G034900 1.0kb upstream 1.0kb upstream 6065 true Chr03: 3195611-3201675 Sorghum bicolor
Sobic.003G034900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3200676-3201675 Sorghum bicolor
Sobic.003G034900 1.0kb downstream 1.0kb downstream 6065 true Chr03: 3194611-3200675 Sorghum bicolor
Sobic.003G034900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3194611-3195610 Sorghum bicolor
Sobic.003G034900 2.0kb upstream 2.0kb upstream 7065 true Chr03: 3195611-3202675 Sorghum bicolor
Sobic.003G034900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3200676-3202675 Sorghum bicolor
Sobic.003G034900 2.0kb downstream 2.0kb downstream 7065 true Chr03: 3193611-3200675 Sorghum bicolor
Sobic.003G034900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3193611-3195610 Sorghum bicolor
Sobic.003G034900 5.0kb upstream 5.0kb upstream 10065 true Chr03: 3195611-3205675 Sorghum bicolor
Sobic.003G034900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3200676-3205675 Sorghum bicolor
Sobic.003G034900 5.0kb downstream 5.0kb downstream 10065 true Chr03: 3190611-3200675 Sorghum bicolor
Sobic.003G034900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3190611-3195610 Sorghum bicolor
Sobic.003G034900 10.0kb upstream 10.0kb upstream 15065 true Chr03: 3195611-3210675 Sorghum bicolor
Sobic.003G034900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3200676-3210675 Sorghum bicolor
Sobic.003G034900 10.0kb downstream 10.0kb downstream 15065 true Chr03: 3185611-3200675 Sorghum bicolor
Sobic.003G034900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3185611-3195610 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041394 5273 Angiosperm View MSA
122189080 5267 Panicoideae View MSA
124574686 5269 Grass View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.103     High  
cufflinks 13.563     High Low
cufflinks 20.416     High  
cufflinks 23.247     High  
cufflinks 43.023     High  
cufflinks 15.289     High Low
cufflinks 42.229     High  
cufflinks 22.042     High  
cufflinks 35.53     High  
cufflinks 44.821     High  
cufflinks 81.102     High High
cufflinks 65.534     High  
cufflinks 32.171     High  
cufflinks 99.968     High High
cufflinks 46.906     High  
cufflinks 20.16     High  
cufflinks 47.298     High  
cufflinks 49.596     High  
cufflinks 20.486     High  
cufflinks 42.456     High  
cufflinks 25.784     High  
cufflinks 115.814     High High
cufflinks 107.694     High High
cufflinks 112.455     High High
cufflinks 12.623     High Low
cufflinks 14.517     High Low
cufflinks 45.155     High  
cufflinks 9.539       Low
cufflinks 43.36     High  
cufflinks 39.0     High  

0 Strain