Gene : Sobic.003G099300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13586//PTHR13586:SF4 - SCD6 PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1046
Name:  ? Sobic.003G099300 Secondary Identifier:  ? PAC:37913045
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G099300 0.5kb upstream 0.5kb upstream 6743 true Chr03: 8743583-8750325 Sorghum bicolor
Sobic.003G099300 0.5kb upstream 0.5kb upstream 500 false Chr03: 8749826-8750325 Sorghum bicolor
Sobic.003G099300 0.5kb downstream 0.5kb downstream 6743 true Chr03: 8743083-8749825 Sorghum bicolor
Sobic.003G099300 0.5kb downstream 0.5kb downstream 500 false Chr03: 8743083-8743582 Sorghum bicolor
Sobic.003G099300 1.0kb upstream 1.0kb upstream 7243 true Chr03: 8743583-8750825 Sorghum bicolor
Sobic.003G099300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 8749826-8750825 Sorghum bicolor
Sobic.003G099300 1.0kb downstream 1.0kb downstream 7243 true Chr03: 8742583-8749825 Sorghum bicolor
Sobic.003G099300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 8742583-8743582 Sorghum bicolor
Sobic.003G099300 2.0kb upstream 2.0kb upstream 8243 true Chr03: 8743583-8751825 Sorghum bicolor
Sobic.003G099300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 8749826-8751825 Sorghum bicolor
Sobic.003G099300 2.0kb downstream 2.0kb downstream 8243 true Chr03: 8741583-8749825 Sorghum bicolor
Sobic.003G099300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 8741583-8743582 Sorghum bicolor
Sobic.003G099300 5.0kb upstream 5.0kb upstream 11243 true Chr03: 8743583-8754825 Sorghum bicolor
Sobic.003G099300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 8749826-8754825 Sorghum bicolor
Sobic.003G099300 5.0kb downstream 5.0kb downstream 11243 true Chr03: 8738583-8749825 Sorghum bicolor
Sobic.003G099300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 8738583-8743582 Sorghum bicolor
Sobic.003G099300 10.0kb upstream 10.0kb upstream 16243 true Chr03: 8743583-8759825 Sorghum bicolor
Sobic.003G099300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 8749826-8759825 Sorghum bicolor
Sobic.003G099300 10.0kb downstream 10.0kb downstream 16243 true Chr03: 8733583-8749825 Sorghum bicolor
Sobic.003G099300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 8733583-8743582 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185744 5267 Panicoideae View MSA
124576566 5269 Grass View MSA
122051702 5273 Angiosperm View MSA
121348013 5274 Embryophyte View MSA
123428687 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.141     High  
cufflinks 9.763     High Low
cufflinks 10.674     High Low
cufflinks 13.09     High Low
cufflinks 31.735     High  
cufflinks 17.011     High  
cufflinks 29.93     High  
cufflinks 16.731     High Low
cufflinks 33.457     High  
cufflinks 35.973     High  
cufflinks 33.497     High  
cufflinks 37.072     High  
cufflinks 31.347     High  
cufflinks 37.158     High  
cufflinks 25.79     High  
cufflinks 14.295     High Low
cufflinks 28.913     High  
cufflinks 29.575     High  
cufflinks 31.02     High  
cufflinks 25.813     High  
cufflinks 48.145     High High
cufflinks 41.197     High  
cufflinks 38.032     High  
cufflinks 41.698     High High
cufflinks 14.506     High Low
cufflinks 10.877     High Low
cufflinks 25.382     High  
cufflinks 22.39     High  
cufflinks 25.04     High  
cufflinks 28.225     High  

0 Strain