Gene : Sobic.003G074900 S. bicolor v3.1.1
Defline:  similar to Putative uncharacterized protein P0019D06.41 Genomic Order:  784
Name:  ? Sobic.003G074900 Secondary Identifier:  ? PAC:37914395
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G074900 0.5kb upstream 0.5kb upstream 4933 true Chr03: 6368169-6373101 Sorghum bicolor
Sobic.003G074900 0.5kb upstream 0.5kb upstream 500 false Chr03: 6368169-6368668 Sorghum bicolor
Sobic.003G074900 0.5kb downstream 0.5kb downstream 4933 true Chr03: 6368669-6373601 Sorghum bicolor
Sobic.003G074900 0.5kb downstream 0.5kb downstream 500 false Chr03: 6373102-6373601 Sorghum bicolor
Sobic.003G074900 1.0kb upstream 1.0kb upstream 5433 true Chr03: 6367669-6373101 Sorghum bicolor
Sobic.003G074900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 6367669-6368668 Sorghum bicolor
Sobic.003G074900 1.0kb downstream 1.0kb downstream 5433 true Chr03: 6368669-6374101 Sorghum bicolor
Sobic.003G074900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 6373102-6374101 Sorghum bicolor
Sobic.003G074900 2.0kb upstream 2.0kb upstream 6433 true Chr03: 6366669-6373101 Sorghum bicolor
Sobic.003G074900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 6366669-6368668 Sorghum bicolor
Sobic.003G074900 2.0kb downstream 2.0kb downstream 6433 true Chr03: 6368669-6375101 Sorghum bicolor
Sobic.003G074900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 6373102-6375101 Sorghum bicolor
Sobic.003G074900 5.0kb upstream 5.0kb upstream 9433 true Chr03: 6363669-6373101 Sorghum bicolor
Sobic.003G074900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 6363669-6368668 Sorghum bicolor
Sobic.003G074900 5.0kb downstream 5.0kb downstream 9433 true Chr03: 6368669-6378101 Sorghum bicolor
Sobic.003G074900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 6373102-6378101 Sorghum bicolor
Sobic.003G074900 10.0kb upstream 10.0kb upstream 14433 true Chr03: 6358669-6373101 Sorghum bicolor
Sobic.003G074900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 6358669-6368668 Sorghum bicolor
Sobic.003G074900 10.0kb downstream 10.0kb downstream 14433 true Chr03: 6368669-6383101 Sorghum bicolor
Sobic.003G074900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 6373102-6383101 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192012 5267 Panicoideae View MSA
124576394 5269 Grass View MSA
122046914 5273 Angiosperm View MSA
121346095 5274 Embryophyte View MSA
123380327 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.322     High High
cufflinks 3.744       Low
cufflinks 5.076       Low
cufflinks 4.159       Low
cufflinks 19.141     High High
cufflinks 5.541        
cufflinks 10.798        
cufflinks 7.068        
cufflinks 7.443        
cufflinks 8.674        
cufflinks 8.282        
cufflinks 7.549        
cufflinks 8.03        
cufflinks 9.276        
cufflinks 15.042     High High
cufflinks 6.206        
cufflinks 11.662     High  
cufflinks 11.879     High  
cufflinks 5.708        
cufflinks 11.834        
cufflinks 19.707     High High
cufflinks 9.458        
cufflinks 8.201        
cufflinks 8.661        
cufflinks 5.093       Low
cufflinks 4.138       Low
cufflinks 4.881       Low
cufflinks 4.379       Low
cufflinks 11.571     High  
cufflinks 15.309     High High

0 Strain