Gene : Sobic.003G074700 S. bicolor v3.1.1
Defline:  (1 of 2) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide) Genomic Order:  782
Name:  ? Sobic.003G074700 Secondary Identifier:  ? PAC:37913159
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G074700 0.5kb upstream 0.5kb upstream 2533 true Chr03: 6359980-6362512 Sorghum bicolor
Sobic.003G074700 0.5kb upstream 0.5kb upstream 500 false Chr03: 6359980-6360479 Sorghum bicolor
Sobic.003G074700 0.5kb downstream 0.5kb downstream 2533 true Chr03: 6360480-6363012 Sorghum bicolor
Sobic.003G074700 0.5kb downstream 0.5kb downstream 500 false Chr03: 6362513-6363012 Sorghum bicolor
Sobic.003G074700 1.0kb upstream 1.0kb upstream 3033 true Chr03: 6359480-6362512 Sorghum bicolor
Sobic.003G074700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 6359480-6360479 Sorghum bicolor
Sobic.003G074700 1.0kb downstream 1.0kb downstream 3033 true Chr03: 6360480-6363512 Sorghum bicolor
Sobic.003G074700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 6362513-6363512 Sorghum bicolor
Sobic.003G074700 2.0kb upstream 2.0kb upstream 4033 true Chr03: 6358480-6362512 Sorghum bicolor
Sobic.003G074700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 6358480-6360479 Sorghum bicolor
Sobic.003G074700 2.0kb downstream 2.0kb downstream 4033 true Chr03: 6360480-6364512 Sorghum bicolor
Sobic.003G074700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 6362513-6364512 Sorghum bicolor
Sobic.003G074700 5.0kb upstream 5.0kb upstream 7033 true Chr03: 6355480-6362512 Sorghum bicolor
Sobic.003G074700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 6355480-6360479 Sorghum bicolor
Sobic.003G074700 5.0kb downstream 5.0kb downstream 7033 true Chr03: 6360480-6367512 Sorghum bicolor
Sobic.003G074700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 6362513-6367512 Sorghum bicolor
Sobic.003G074700 10.0kb upstream 10.0kb upstream 12033 true Chr03: 6350480-6362512 Sorghum bicolor
Sobic.003G074700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 6350480-6360479 Sorghum bicolor
Sobic.003G074700 10.0kb downstream 10.0kb downstream 12033 true Chr03: 6360480-6372512 Sorghum bicolor
Sobic.003G074700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 6362513-6372512 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185172 5267 Panicoideae View MSA
124577951 5269 Grass View MSA
122045781 5273 Angiosperm View MSA
121346461 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.01     Low Low
cufflinks 29.477     High High
cufflinks 17.511     High High
cufflinks 6.488        
cufflinks 1.449        
cufflinks 10.015        
cufflinks 10.128        
cufflinks 29.945     High High
cufflinks 0.433        
cufflinks 0.225        
cufflinks 0.044     Low Low
cufflinks 0.096     Low  
cufflinks 0.947        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.038        
cufflinks 24.824     High High
cufflinks 7.638        
cufflinks 14.34     High  
cufflinks 26.857     High High
cufflinks 2.195        
cufflinks 1.741        
cufflinks 0.034     Low Low
cufflinks 0.027     Low Low
cufflinks 0.023     Low Low
cufflinks 3.288        
cufflinks 25.174     High High
cufflinks 0.016     Low Low
cufflinks 0.033     Low Low
cufflinks 21.796     High High
cufflinks 4.348        

0 Strain