Gene : Sobic.003G077300 S. bicolor v3.1.1
Defline:  (1 of 1) K15901 - EKC/KEOPS complex subunit CGI121/TPRKB (CGI121, TPRKB) Genomic Order:  809
Name:  ? Sobic.003G077300 Secondary Identifier:  ? PAC:37916870
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G077300 0.5kb upstream 0.5kb upstream 4611 true Chr03: 6595626-6600236 Sorghum bicolor
Sobic.003G077300 0.5kb upstream 0.5kb upstream 500 false Chr03: 6599737-6600236 Sorghum bicolor
Sobic.003G077300 0.5kb downstream 0.5kb downstream 4611 true Chr03: 6595126-6599736 Sorghum bicolor
Sobic.003G077300 0.5kb downstream 0.5kb downstream 500 false Chr03: 6595126-6595625 Sorghum bicolor
Sobic.003G077300 1.0kb upstream 1.0kb upstream 5111 true Chr03: 6595626-6600736 Sorghum bicolor
Sobic.003G077300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 6599737-6600736 Sorghum bicolor
Sobic.003G077300 1.0kb downstream 1.0kb downstream 5111 true Chr03: 6594626-6599736 Sorghum bicolor
Sobic.003G077300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 6594626-6595625 Sorghum bicolor
Sobic.003G077300 2.0kb upstream 2.0kb upstream 6111 true Chr03: 6595626-6601736 Sorghum bicolor
Sobic.003G077300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 6599737-6601736 Sorghum bicolor
Sobic.003G077300 2.0kb downstream 2.0kb downstream 6111 true Chr03: 6593626-6599736 Sorghum bicolor
Sobic.003G077300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 6593626-6595625 Sorghum bicolor
Sobic.003G077300 5.0kb upstream 5.0kb upstream 9111 true Chr03: 6595626-6604736 Sorghum bicolor
Sobic.003G077300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 6599737-6604736 Sorghum bicolor
Sobic.003G077300 5.0kb downstream 5.0kb downstream 9111 true Chr03: 6590626-6599736 Sorghum bicolor
Sobic.003G077300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 6590626-6595625 Sorghum bicolor
Sobic.003G077300 10.0kb upstream 10.0kb upstream 14111 true Chr03: 6595626-6609736 Sorghum bicolor
Sobic.003G077300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 6599737-6609736 Sorghum bicolor
Sobic.003G077300 10.0kb downstream 10.0kb downstream 14111 true Chr03: 6585626-6599736 Sorghum bicolor
Sobic.003G077300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 6585626-6595625 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026161 5273 Angiosperm View MSA
122189082 5267 Panicoideae View MSA
124576189 5269 Grass View MSA
121345637 5274 Embryophyte View MSA
123425208 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.188       High
cufflinks 0.374       Low
cufflinks 0.932        
cufflinks 1.572        
cufflinks 1.646        
cufflinks 1.168        
cufflinks 1.517        
cufflinks 0.365       Low
cufflinks 0.869        
cufflinks 1.306        
cufflinks 1.184        
cufflinks 0.909        
cufflinks 0.589       Low
cufflinks 1.16        
cufflinks 1.742        
cufflinks 0.947        
cufflinks 1.581        
cufflinks 1.663        
cufflinks 0.352       Low
cufflinks 1.821        
cufflinks 6.57       High
cufflinks 1.545        
cufflinks 1.133        
cufflinks 1.341        
cufflinks 0.793        
cufflinks 0.283       Low
cufflinks 0.874        
cufflinks 2.358       High
cufflinks 1.156        
cufflinks 2.871       High

0 Strain