Gene : Sobic.003G085900 S. bicolor v3.1.1
Defline:  (1 of 1) 3.2.1.177//3.2.1.37//3.2.1.55 - Alpha-D-xyloside xylohydrolase / Alpha-xylosidase // Xylan 1,4-beta-xylosidase / Xylobiase // Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase Genomic Order:  903
Name:  ? Sobic.003G085900 Secondary Identifier:  ? PAC:37914218
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G085900 0.5kb upstream 0.5kb upstream 7329 true Chr03: 7424497-7431825 Sorghum bicolor
Sobic.003G085900 0.5kb upstream 0.5kb upstream 500 false Chr03: 7431326-7431825 Sorghum bicolor
Sobic.003G085900 0.5kb downstream 0.5kb downstream 7329 true Chr03: 7423997-7431325 Sorghum bicolor
Sobic.003G085900 0.5kb downstream 0.5kb downstream 500 false Chr03: 7423997-7424496 Sorghum bicolor
Sobic.003G085900 1.0kb upstream 1.0kb upstream 7829 true Chr03: 7424497-7432325 Sorghum bicolor
Sobic.003G085900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 7431326-7432325 Sorghum bicolor
Sobic.003G085900 1.0kb downstream 1.0kb downstream 7829 true Chr03: 7423497-7431325 Sorghum bicolor
Sobic.003G085900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 7423497-7424496 Sorghum bicolor
Sobic.003G085900 2.0kb upstream 2.0kb upstream 8829 true Chr03: 7424497-7433325 Sorghum bicolor
Sobic.003G085900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 7431326-7433325 Sorghum bicolor
Sobic.003G085900 2.0kb downstream 2.0kb downstream 8829 true Chr03: 7422497-7431325 Sorghum bicolor
Sobic.003G085900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 7422497-7424496 Sorghum bicolor
Sobic.003G085900 5.0kb upstream 5.0kb upstream 11829 true Chr03: 7424497-7436325 Sorghum bicolor
Sobic.003G085900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 7431326-7436325 Sorghum bicolor
Sobic.003G085900 5.0kb downstream 5.0kb downstream 11829 true Chr03: 7419497-7431325 Sorghum bicolor
Sobic.003G085900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 7419497-7424496 Sorghum bicolor
Sobic.003G085900 10.0kb upstream 10.0kb upstream 16829 true Chr03: 7424497-7441325 Sorghum bicolor
Sobic.003G085900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 7431326-7441325 Sorghum bicolor
Sobic.003G085900 10.0kb downstream 10.0kb downstream 16829 true Chr03: 7414497-7431325 Sorghum bicolor
Sobic.003G085900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 7414497-7424496 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195054 5267 Panicoideae View MSA
124584741 5269 Grass View MSA
122047765 5273 Angiosperm View MSA
121351039 5274 Embryophyte View MSA
123427739 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.575     High High
cufflinks 0.077       Low
cufflinks 0.068       Low
cufflinks 0.192       Low
cufflinks 7.992        
cufflinks 0.64        
cufflinks 9.561        
cufflinks 1.388        
cufflinks 2.064        
cufflinks 2.836        
cufflinks 3.822        
cufflinks 4.257        
cufflinks 4.721        
cufflinks 9.254        
cufflinks 15.072     High High
cufflinks 0.143       Low
cufflinks 8.441        
cufflinks 8.916        
cufflinks 0.559        
cufflinks 4.844        
cufflinks 15.276     High High
cufflinks 5.06        
cufflinks 6.144        
cufflinks 5.506        
cufflinks 0.204       Low
cufflinks 0.157       Low
cufflinks 1.642        
cufflinks 0.241       Low
cufflinks 5.012        
cufflinks 28.121     High High

0 Strain