Gene : Sobic.003G086700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10759//PTHR10759:SF6 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED Genomic Order:  910
Name:  ? Sobic.003G086700 Secondary Identifier:  ? PAC:37913779
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G086700 0.5kb upstream 0.5kb upstream 4148 true Chr03: 7495311-7499458 Sorghum bicolor
Sobic.003G086700 0.5kb upstream 0.5kb upstream 500 false Chr03: 7495311-7495810 Sorghum bicolor
Sobic.003G086700 0.5kb downstream 0.5kb downstream 4148 true Chr03: 7495811-7499958 Sorghum bicolor
Sobic.003G086700 0.5kb downstream 0.5kb downstream 500 false Chr03: 7499459-7499958 Sorghum bicolor
Sobic.003G086700 1.0kb upstream 1.0kb upstream 4648 true Chr03: 7494811-7499458 Sorghum bicolor
Sobic.003G086700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 7494811-7495810 Sorghum bicolor
Sobic.003G086700 1.0kb downstream 1.0kb downstream 4648 true Chr03: 7495811-7500458 Sorghum bicolor
Sobic.003G086700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 7499459-7500458 Sorghum bicolor
Sobic.003G086700 2.0kb upstream 2.0kb upstream 5648 true Chr03: 7493811-7499458 Sorghum bicolor
Sobic.003G086700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 7493811-7495810 Sorghum bicolor
Sobic.003G086700 2.0kb downstream 2.0kb downstream 5648 true Chr03: 7495811-7501458 Sorghum bicolor
Sobic.003G086700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 7499459-7501458 Sorghum bicolor
Sobic.003G086700 5.0kb upstream 5.0kb upstream 8648 true Chr03: 7490811-7499458 Sorghum bicolor
Sobic.003G086700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 7490811-7495810 Sorghum bicolor
Sobic.003G086700 5.0kb downstream 5.0kb downstream 8648 true Chr03: 7495811-7504458 Sorghum bicolor
Sobic.003G086700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 7499459-7504458 Sorghum bicolor
Sobic.003G086700 10.0kb upstream 10.0kb upstream 13648 true Chr03: 7485811-7499458 Sorghum bicolor
Sobic.003G086700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 7485811-7495810 Sorghum bicolor
Sobic.003G086700 10.0kb downstream 10.0kb downstream 13648 true Chr03: 7495811-7509458 Sorghum bicolor
Sobic.003G086700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 7499459-7509458 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186750 5267 Panicoideae View MSA
124578875 5269 Grass View MSA
122042848 5273 Angiosperm View MSA
121310034 5274 Embryophyte View MSA
123347637 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.089        
cufflinks 0.122       Low
cufflinks 1.179        
cufflinks 1.664        
cufflinks 24.007     High High
cufflinks 0.856        
cufflinks 5.121        
cufflinks 0.929        
cufflinks 4.809        
cufflinks 3.818        
cufflinks 5.218        
cufflinks 5.546        
cufflinks 3.326        
cufflinks 9.56       High
cufflinks 3.79        
cufflinks 1.675        
cufflinks 3.787        
cufflinks 3.622        
cufflinks 3.386        
cufflinks 3.702        
cufflinks 7.363        
cufflinks 4.238        
cufflinks 6.195        
cufflinks 5.113        
cufflinks 0.14       Low
cufflinks 0.093       Low
cufflinks 2.182        
cufflinks 0.637       Low
cufflinks 1.628        
cufflinks 2.114        

0 Strain