Gene : Sobic.003G098200 S. bicolor v3.1.1

Defline:  similar to Os01g0112100 protein Genomic Order:  1033
Name:  ? Sobic.003G098200 Secondary Identifier:  ? PAC:37917737

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G098200 0.5kb upstream 0.5kb upstream 1909 true Chr03: 8671858-8673766 Sorghum bicolor
Sobic.003G098200 0.5kb upstream 0.5kb upstream 500 false Chr03: 8671858-8672357 Sorghum bicolor
Sobic.003G098200 0.5kb downstream 0.5kb downstream 1909 true Chr03: 8672358-8674266 Sorghum bicolor
Sobic.003G098200 0.5kb downstream 0.5kb downstream 500 false Chr03: 8673767-8674266 Sorghum bicolor
Sobic.003G098200 1.0kb upstream 1.0kb upstream 2409 true Chr03: 8671358-8673766 Sorghum bicolor
Sobic.003G098200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 8671358-8672357 Sorghum bicolor
Sobic.003G098200 1.0kb downstream 1.0kb downstream 2409 true Chr03: 8672358-8674766 Sorghum bicolor
Sobic.003G098200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 8673767-8674766 Sorghum bicolor
Sobic.003G098200 2.0kb upstream 2.0kb upstream 3409 true Chr03: 8670358-8673766 Sorghum bicolor
Sobic.003G098200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 8670358-8672357 Sorghum bicolor
Sobic.003G098200 2.0kb downstream 2.0kb downstream 3409 true Chr03: 8672358-8675766 Sorghum bicolor
Sobic.003G098200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 8673767-8675766 Sorghum bicolor
Sobic.003G098200 5.0kb upstream 5.0kb upstream 6409 true Chr03: 8667358-8673766 Sorghum bicolor
Sobic.003G098200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 8667358-8672357 Sorghum bicolor
Sobic.003G098200 5.0kb downstream 5.0kb downstream 6409 true Chr03: 8672358-8678766 Sorghum bicolor
Sobic.003G098200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 8673767-8678766 Sorghum bicolor
Sobic.003G098200 10.0kb upstream 10.0kb upstream 11409 true Chr03: 8662358-8673766 Sorghum bicolor
Sobic.003G098200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 8662358-8672357 Sorghum bicolor
Sobic.003G098200 10.0kb downstream 10.0kb downstream 11409 true Chr03: 8672358-8683766 Sorghum bicolor
Sobic.003G098200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 8673767-8683766 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185548 5267 Panicoideae View MSA
124578683 5269 Grass View MSA
122045595 5273 Angiosperm View MSA
121345688 5274 Embryophyte View MSA
123425911 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.074     High High
cufflinks 0.119       Low
cufflinks 0.228       Low
cufflinks 1.184        
cufflinks 6.102        
cufflinks 1.626        
cufflinks 2.99        
cufflinks 0.485       Low
cufflinks 4.567        
cufflinks 3.985        
cufflinks 3.133        
cufflinks 3.033        
cufflinks 2.185        
cufflinks 3.882        
cufflinks 1.873        
cufflinks 0.294       Low
cufflinks 2.096        
cufflinks 2.337        
cufflinks 0.681       Low
cufflinks 1.977        
cufflinks 8.122       High
cufflinks 5.016        
cufflinks 3.936        
cufflinks 3.938        
cufflinks 0.45       Low
cufflinks 0.129       Low
cufflinks 2.537        
cufflinks 2.902        
cufflinks 3.555        
cufflinks 4.927        

0 Strain