Gene : Sobic.003G098000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23315//PTHR23315:SF65 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  1031
Name:  ? Sobic.003G098000 Secondary Identifier:  ? PAC:37918058
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7511 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G098000 0.5kb upstream 0.5kb upstream 4652 true Chr03: 8663762-8668413 Sorghum bicolor
Sobic.003G098000 0.5kb upstream 0.5kb upstream 500 false Chr03: 8663762-8664261 Sorghum bicolor
Sobic.003G098000 0.5kb downstream 0.5kb downstream 4652 true Chr03: 8664262-8668913 Sorghum bicolor
Sobic.003G098000 0.5kb downstream 0.5kb downstream 500 false Chr03: 8668414-8668913 Sorghum bicolor
Sobic.003G098000 1.0kb upstream 1.0kb upstream 5152 true Chr03: 8663262-8668413 Sorghum bicolor
Sobic.003G098000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 8663262-8664261 Sorghum bicolor
Sobic.003G098000 1.0kb downstream 1.0kb downstream 5152 true Chr03: 8664262-8669413 Sorghum bicolor
Sobic.003G098000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 8668414-8669413 Sorghum bicolor
Sobic.003G098000 2.0kb upstream 2.0kb upstream 6152 true Chr03: 8662262-8668413 Sorghum bicolor
Sobic.003G098000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 8662262-8664261 Sorghum bicolor
Sobic.003G098000 2.0kb downstream 2.0kb downstream 6152 true Chr03: 8664262-8670413 Sorghum bicolor
Sobic.003G098000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 8668414-8670413 Sorghum bicolor
Sobic.003G098000 5.0kb upstream 5.0kb upstream 9152 true Chr03: 8659262-8668413 Sorghum bicolor
Sobic.003G098000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 8659262-8664261 Sorghum bicolor
Sobic.003G098000 5.0kb downstream 5.0kb downstream 9152 true Chr03: 8664262-8673413 Sorghum bicolor
Sobic.003G098000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 8668414-8673413 Sorghum bicolor
Sobic.003G098000 10.0kb upstream 10.0kb upstream 14152 true Chr03: 8654262-8668413 Sorghum bicolor
Sobic.003G098000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 8654262-8664261 Sorghum bicolor
Sobic.003G098000 10.0kb downstream 10.0kb downstream 14152 true Chr03: 8664262-8678413 Sorghum bicolor
Sobic.003G098000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 8668414-8678413 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198166 5267 Panicoideae View MSA
124580841 5269 Grass View MSA
122044762 5273 Angiosperm View MSA
121310337 5274 Embryophyte View MSA
123347849 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.809        
cufflinks 7.626     High  
cufflinks 6.734        
cufflinks 9.135        
cufflinks 1.033       Low
cufflinks 20.473     High High
cufflinks 5.839        
cufflinks 5.802        
cufflinks 11.619       High
cufflinks 12.058     High High
cufflinks 5.125        
cufflinks 11.236       High
cufflinks 10.168        
cufflinks 9.002        
cufflinks 6.815        
cufflinks 9.169        
cufflinks 5.199        
cufflinks 4.842        
cufflinks 8.195        
cufflinks 8.44        
cufflinks 1.366       Low
cufflinks 5.369        
cufflinks 7.869        
cufflinks 6.876        
cufflinks 10.833     High  
cufflinks 5.621        
cufflinks 2.14       Low
cufflinks 11.054     High High
cufflinks 7.407        
cufflinks 4.914        

0 Strain