Gene : Sobic.003G037300 S. bicolor v3.1.1
Defline:  (1 of 7) PF13426 - PAS domain (PAS_9) Genomic Order:  392
Name:  ? Sobic.003G037300 Secondary Identifier:  ? PAC:37914950
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G037300 0.5kb upstream 0.5kb upstream 4210 true Chr03: 3503960-3508169 Sorghum bicolor
Sobic.003G037300 0.5kb upstream 0.5kb upstream 500 false Chr03: 3503960-3504459 Sorghum bicolor
Sobic.003G037300 0.5kb downstream 0.5kb downstream 4210 true Chr03: 3504460-3508669 Sorghum bicolor
Sobic.003G037300 0.5kb downstream 0.5kb downstream 500 false Chr03: 3508170-3508669 Sorghum bicolor
Sobic.003G037300 1.0kb upstream 1.0kb upstream 4710 true Chr03: 3503460-3508169 Sorghum bicolor
Sobic.003G037300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3503460-3504459 Sorghum bicolor
Sobic.003G037300 1.0kb downstream 1.0kb downstream 4710 true Chr03: 3504460-3509169 Sorghum bicolor
Sobic.003G037300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3508170-3509169 Sorghum bicolor
Sobic.003G037300 2.0kb upstream 2.0kb upstream 5710 true Chr03: 3502460-3508169 Sorghum bicolor
Sobic.003G037300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3502460-3504459 Sorghum bicolor
Sobic.003G037300 2.0kb downstream 2.0kb downstream 5710 true Chr03: 3504460-3510169 Sorghum bicolor
Sobic.003G037300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3508170-3510169 Sorghum bicolor
Sobic.003G037300 5.0kb upstream 5.0kb upstream 8710 true Chr03: 3499460-3508169 Sorghum bicolor
Sobic.003G037300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3499460-3504459 Sorghum bicolor
Sobic.003G037300 5.0kb downstream 5.0kb downstream 8710 true Chr03: 3504460-3513169 Sorghum bicolor
Sobic.003G037300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3508170-3513169 Sorghum bicolor
Sobic.003G037300 10.0kb upstream 10.0kb upstream 13710 true Chr03: 3494460-3508169 Sorghum bicolor
Sobic.003G037300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3494460-3504459 Sorghum bicolor
Sobic.003G037300 10.0kb downstream 10.0kb downstream 13710 true Chr03: 3504460-3518169 Sorghum bicolor
Sobic.003G037300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3508170-3518169 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179675 5267 Panicoideae View MSA
124576216 5269 Grass View MSA
122045856 5273 Angiosperm View MSA
121348460 5274 Embryophyte View MSA
123424929 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.566        
cufflinks 19.609     High High
cufflinks 2.149        
cufflinks 4.025        
cufflinks 1.746        
cufflinks 15.489     High High
cufflinks 2.326        
cufflinks 7.337       High
cufflinks 3.957        
cufflinks 3.092        
cufflinks 1.267       Low
cufflinks 1.906        
cufflinks 2.374        
cufflinks 2.004        
cufflinks 2.311        
cufflinks 10.574     High High
cufflinks 3.503        
cufflinks 1.505        
cufflinks 5.984        
cufflinks 5.392        
cufflinks 2.836        
cufflinks 2.124        
cufflinks 1.412        
cufflinks 1.078       Low
cufflinks 12.476     High High
cufflinks 12.816     High High
cufflinks 1.462        
cufflinks 1.361        
cufflinks 3.378        
cufflinks 2.38        

0 Strain