Gene : Sobic.003G038600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR21148//PTHR21148:SF1 - PHOSDUCIN-RELATED // PHOSDUCIN-LIKE PROTEIN 3 Genomic Order:  405
Name:  ? Sobic.003G038600 Secondary Identifier:  ? PAC:37915639
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G038600 0.5kb upstream 0.5kb upstream 3748 true Chr03: 3599024-3602771 Sorghum bicolor
Sobic.003G038600 0.5kb upstream 0.5kb upstream 500 false Chr03: 3599024-3599523 Sorghum bicolor
Sobic.003G038600 0.5kb downstream 0.5kb downstream 3748 true Chr03: 3599524-3603271 Sorghum bicolor
Sobic.003G038600 0.5kb downstream 0.5kb downstream 500 false Chr03: 3602772-3603271 Sorghum bicolor
Sobic.003G038600 1.0kb upstream 1.0kb upstream 4248 true Chr03: 3598524-3602771 Sorghum bicolor
Sobic.003G038600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3598524-3599523 Sorghum bicolor
Sobic.003G038600 1.0kb downstream 1.0kb downstream 4248 true Chr03: 3599524-3603771 Sorghum bicolor
Sobic.003G038600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3602772-3603771 Sorghum bicolor
Sobic.003G038600 2.0kb upstream 2.0kb upstream 5248 true Chr03: 3597524-3602771 Sorghum bicolor
Sobic.003G038600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3597524-3599523 Sorghum bicolor
Sobic.003G038600 2.0kb downstream 2.0kb downstream 5248 true Chr03: 3599524-3604771 Sorghum bicolor
Sobic.003G038600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3602772-3604771 Sorghum bicolor
Sobic.003G038600 5.0kb upstream 5.0kb upstream 8248 true Chr03: 3594524-3602771 Sorghum bicolor
Sobic.003G038600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3594524-3599523 Sorghum bicolor
Sobic.003G038600 5.0kb downstream 5.0kb downstream 8248 true Chr03: 3599524-3607771 Sorghum bicolor
Sobic.003G038600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3602772-3607771 Sorghum bicolor
Sobic.003G038600 10.0kb upstream 10.0kb upstream 13248 true Chr03: 3589524-3602771 Sorghum bicolor
Sobic.003G038600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3589524-3599523 Sorghum bicolor
Sobic.003G038600 10.0kb downstream 10.0kb downstream 13248 true Chr03: 3599524-3612771 Sorghum bicolor
Sobic.003G038600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3602772-3612771 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199613 5267 Panicoideae View MSA
124573104 5269 Grass View MSA
122042488 5273 Angiosperm View MSA
121344718 5274 Embryophyte View MSA
123424986 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.995     High High
cufflinks 3.348       Low
cufflinks 7.51        
cufflinks 12.681     High  
cufflinks 10.571        
cufflinks 11.552        
cufflinks 8.328        
cufflinks 3.104       Low
cufflinks 13.913     High  
cufflinks 13.15     High  
cufflinks 7.863        
cufflinks 9.603        
cufflinks 9.973        
cufflinks 9.992        
cufflinks 10.093        
cufflinks 7.281        
cufflinks 8.908        
cufflinks 9.098        
cufflinks 6.415        
cufflinks 12.436     High  
cufflinks 8.943        
cufflinks 12.603     High  
cufflinks 11.833     High  
cufflinks 11.379     High  
cufflinks 5.522       Low
cufflinks 2.528       Low
cufflinks 8.481        
cufflinks 21.815     High High
cufflinks 5.542       Low
cufflinks 12.088     High  

0 Strain