Gene : Sobic.003G041300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31791:SF10 - FRIGIDA-LIKE PROTEIN 1-RELATED Genomic Order:  432
Name:  ? Sobic.003G041300 Secondary Identifier:  ? PAC:37914994
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G041300 0.5kb upstream 0.5kb upstream 4156 true Chr03: 3849984-3854139 Sorghum bicolor
Sobic.003G041300 0.5kb upstream 0.5kb upstream 500 false Chr03: 3849984-3850483 Sorghum bicolor
Sobic.003G041300 0.5kb downstream 0.5kb downstream 4156 true Chr03: 3850484-3854639 Sorghum bicolor
Sobic.003G041300 0.5kb downstream 0.5kb downstream 500 false Chr03: 3854140-3854639 Sorghum bicolor
Sobic.003G041300 1.0kb upstream 1.0kb upstream 4656 true Chr03: 3849484-3854139 Sorghum bicolor
Sobic.003G041300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3849484-3850483 Sorghum bicolor
Sobic.003G041300 1.0kb downstream 1.0kb downstream 4656 true Chr03: 3850484-3855139 Sorghum bicolor
Sobic.003G041300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3854140-3855139 Sorghum bicolor
Sobic.003G041300 2.0kb upstream 2.0kb upstream 5656 true Chr03: 3848484-3854139 Sorghum bicolor
Sobic.003G041300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3848484-3850483 Sorghum bicolor
Sobic.003G041300 2.0kb downstream 2.0kb downstream 5656 true Chr03: 3850484-3856139 Sorghum bicolor
Sobic.003G041300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3854140-3856139 Sorghum bicolor
Sobic.003G041300 5.0kb upstream 5.0kb upstream 8656 true Chr03: 3845484-3854139 Sorghum bicolor
Sobic.003G041300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3845484-3850483 Sorghum bicolor
Sobic.003G041300 5.0kb downstream 5.0kb downstream 8656 true Chr03: 3850484-3859139 Sorghum bicolor
Sobic.003G041300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3854140-3859139 Sorghum bicolor
Sobic.003G041300 10.0kb upstream 10.0kb upstream 13656 true Chr03: 3840484-3854139 Sorghum bicolor
Sobic.003G041300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3840484-3850483 Sorghum bicolor
Sobic.003G041300 10.0kb downstream 10.0kb downstream 13656 true Chr03: 3850484-3864139 Sorghum bicolor
Sobic.003G041300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3854140-3864139 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182806 5267 Panicoideae View MSA
124578983 5269 Grass View MSA
122049727 5273 Angiosperm View MSA
121311561 5274 Embryophyte View MSA
123348841 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.286     High High
cufflinks 2.614       Low
cufflinks 3.102       Low
cufflinks 4.597        
cufflinks 8.438        
cufflinks 3.542       Low
cufflinks 8.551        
cufflinks 4.14       Low
cufflinks 8.548        
cufflinks 8.759        
cufflinks 10.205        
cufflinks 13.223     High  
cufflinks 5.853        
cufflinks 17.25     High High
cufflinks 5.931        
cufflinks 4.651        
cufflinks 10.125        
cufflinks 10.346        
cufflinks 4.838        
cufflinks 10.451        
cufflinks 24.352     High High
cufflinks 13.918     High  
cufflinks 15.378     High  
cufflinks 16.297     High High
cufflinks 3.819       Low
cufflinks 2.472       Low
cufflinks 7.233        
cufflinks 23.765     High High
cufflinks 8.093        
cufflinks 8.487        

0 Strain