Gene : Sobic.003G045400 S. bicolor v3.1.1
Defline:  (1 of 2) K03015 - DNA-directed RNA polymerase II subunit RPB7 (RPB7, POLR2G) Genomic Order:  475
Name:  ? Sobic.003G045400 Secondary Identifier:  ? PAC:37915855
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G045400 0.5kb upstream 0.5kb upstream 2925 true Chr03: 4151632-4154556 Sorghum bicolor
Sobic.003G045400 0.5kb upstream 0.5kb upstream 500 false Chr03: 4154057-4154556 Sorghum bicolor
Sobic.003G045400 0.5kb downstream 0.5kb downstream 2925 true Chr03: 4151132-4154056 Sorghum bicolor
Sobic.003G045400 0.5kb downstream 0.5kb downstream 500 false Chr03: 4151132-4151631 Sorghum bicolor
Sobic.003G045400 1.0kb upstream 1.0kb upstream 3425 true Chr03: 4151632-4155056 Sorghum bicolor
Sobic.003G045400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 4154057-4155056 Sorghum bicolor
Sobic.003G045400 1.0kb downstream 1.0kb downstream 3425 true Chr03: 4150632-4154056 Sorghum bicolor
Sobic.003G045400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 4150632-4151631 Sorghum bicolor
Sobic.003G045400 2.0kb upstream 2.0kb upstream 4425 true Chr03: 4151632-4156056 Sorghum bicolor
Sobic.003G045400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 4154057-4156056 Sorghum bicolor
Sobic.003G045400 2.0kb downstream 2.0kb downstream 4425 true Chr03: 4149632-4154056 Sorghum bicolor
Sobic.003G045400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 4149632-4151631 Sorghum bicolor
Sobic.003G045400 5.0kb upstream 5.0kb upstream 7425 true Chr03: 4151632-4159056 Sorghum bicolor
Sobic.003G045400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 4154057-4159056 Sorghum bicolor
Sobic.003G045400 5.0kb downstream 5.0kb downstream 7425 true Chr03: 4146632-4154056 Sorghum bicolor
Sobic.003G045400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 4146632-4151631 Sorghum bicolor
Sobic.003G045400 10.0kb upstream 10.0kb upstream 12425 true Chr03: 4151632-4164056 Sorghum bicolor
Sobic.003G045400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 4154057-4164056 Sorghum bicolor
Sobic.003G045400 10.0kb downstream 10.0kb downstream 12425 true Chr03: 4141632-4154056 Sorghum bicolor
Sobic.003G045400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 4141632-4151631 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192465 5267 Panicoideae View MSA
124570510 5269 Grass View MSA
122045109 5273 Angiosperm View MSA
121343808 5274 Embryophyte View MSA
123424516 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.683     High High
cufflinks 4.811       Low
cufflinks 12.091     High  
cufflinks 22.309     High High
cufflinks 9.678        
cufflinks 15.434     High  
cufflinks 8.166        
cufflinks 5.517       Low
cufflinks 15.239     High  
cufflinks 14.526     High  
cufflinks 8.87        
cufflinks 8.256        
cufflinks 12.645     High  
cufflinks 9.051        
cufflinks 17.606     High High
cufflinks 13.581     High  
cufflinks 8.226        
cufflinks 7.943        
cufflinks 8.807        
cufflinks 10.861        
cufflinks 14.128        
cufflinks 12.757     High  
cufflinks 9.463        
cufflinks 8.843        
cufflinks 6.489       Low
cufflinks 4.245       Low
cufflinks 10.997        
cufflinks 29.929     High High
cufflinks 6.5       Low
cufflinks 20.929     High High

0 Strain