Gene : Sobic.003G047200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR33427//PTHR33427:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MQD17 Genomic Order:  493
Name:  ? Sobic.003G047200 Secondary Identifier:  ? PAC:37918852
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G047200 0.5kb upstream 0.5kb upstream 4227 true Chr03: 4310458-4314684 Sorghum bicolor
Sobic.003G047200 0.5kb upstream 0.5kb upstream 500 false Chr03: 4310458-4310957 Sorghum bicolor
Sobic.003G047200 0.5kb downstream 0.5kb downstream 4227 true Chr03: 4310958-4315184 Sorghum bicolor
Sobic.003G047200 0.5kb downstream 0.5kb downstream 500 false Chr03: 4314685-4315184 Sorghum bicolor
Sobic.003G047200 1.0kb upstream 1.0kb upstream 4727 true Chr03: 4309958-4314684 Sorghum bicolor
Sobic.003G047200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 4309958-4310957 Sorghum bicolor
Sobic.003G047200 1.0kb downstream 1.0kb downstream 4727 true Chr03: 4310958-4315684 Sorghum bicolor
Sobic.003G047200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 4314685-4315684 Sorghum bicolor
Sobic.003G047200 2.0kb upstream 2.0kb upstream 5727 true Chr03: 4308958-4314684 Sorghum bicolor
Sobic.003G047200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 4308958-4310957 Sorghum bicolor
Sobic.003G047200 2.0kb downstream 2.0kb downstream 5727 true Chr03: 4310958-4316684 Sorghum bicolor
Sobic.003G047200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 4314685-4316684 Sorghum bicolor
Sobic.003G047200 5.0kb upstream 5.0kb upstream 8727 true Chr03: 4305958-4314684 Sorghum bicolor
Sobic.003G047200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 4305958-4310957 Sorghum bicolor
Sobic.003G047200 5.0kb downstream 5.0kb downstream 8727 true Chr03: 4310958-4319684 Sorghum bicolor
Sobic.003G047200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 4314685-4319684 Sorghum bicolor
Sobic.003G047200 10.0kb upstream 10.0kb upstream 13727 true Chr03: 4300958-4314684 Sorghum bicolor
Sobic.003G047200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 4300958-4310957 Sorghum bicolor
Sobic.003G047200 10.0kb downstream 10.0kb downstream 13727 true Chr03: 4310958-4324684 Sorghum bicolor
Sobic.003G047200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 4314685-4324684 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177600 5267 Panicoideae View MSA
124580093 5269 Grass View MSA
122044746 5273 Angiosperm View MSA
121349480 5274 Embryophyte View MSA
123381326 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.037     Low Low
cufflinks 0.056       Low
cufflinks 0.02     Low Low
cufflinks 0.022     Low Low
cufflinks 21.551     High High
cufflinks 0.478        
cufflinks 10.079        
cufflinks 0.33        
cufflinks 0.104        
cufflinks 0.925        
cufflinks 8.932        
cufflinks 5.927        
cufflinks 0.247        
cufflinks 8.091        
cufflinks 3.723        
cufflinks 0.072     Low Low
cufflinks 10.853        
cufflinks 10.938        
cufflinks 0.73        
cufflinks 7.49        
cufflinks 24.456     High High
cufflinks 7.381        
cufflinks 8.18        
cufflinks 8.356        
cufflinks 0.016     Low Low
cufflinks 0.029     Low Low
cufflinks 2.678        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.537        
cufflinks 6.87        

0 Strain