Gene : Sobic.003G052800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR16212:SF4 - FOCADHESIN Genomic Order:  550
Name:  ? Sobic.003G052800 Secondary Identifier:  ? PAC:37914294
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G052800 0.5kb upstream 0.5kb upstream 15856 true Chr03: 4764303-4780158 Sorghum bicolor
Sobic.003G052800 0.5kb upstream 0.5kb upstream 500 false Chr03: 4764303-4764802 Sorghum bicolor
Sobic.003G052800 0.5kb downstream 0.5kb downstream 15856 true Chr03: 4764803-4780658 Sorghum bicolor
Sobic.003G052800 0.5kb downstream 0.5kb downstream 500 false Chr03: 4780159-4780658 Sorghum bicolor
Sobic.003G052800 1.0kb upstream 1.0kb upstream 16356 true Chr03: 4763803-4780158 Sorghum bicolor
Sobic.003G052800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 4763803-4764802 Sorghum bicolor
Sobic.003G052800 1.0kb downstream 1.0kb downstream 16356 true Chr03: 4764803-4781158 Sorghum bicolor
Sobic.003G052800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 4780159-4781158 Sorghum bicolor
Sobic.003G052800 2.0kb upstream 2.0kb upstream 17356 true Chr03: 4762803-4780158 Sorghum bicolor
Sobic.003G052800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 4762803-4764802 Sorghum bicolor
Sobic.003G052800 2.0kb downstream 2.0kb downstream 17356 true Chr03: 4764803-4782158 Sorghum bicolor
Sobic.003G052800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 4780159-4782158 Sorghum bicolor
Sobic.003G052800 5.0kb upstream 5.0kb upstream 20356 true Chr03: 4759803-4780158 Sorghum bicolor
Sobic.003G052800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 4759803-4764802 Sorghum bicolor
Sobic.003G052800 5.0kb downstream 5.0kb downstream 20356 true Chr03: 4764803-4785158 Sorghum bicolor
Sobic.003G052800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 4780159-4785158 Sorghum bicolor
Sobic.003G052800 10.0kb upstream 10.0kb upstream 25356 true Chr03: 4754803-4780158 Sorghum bicolor
Sobic.003G052800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 4754803-4764802 Sorghum bicolor
Sobic.003G052800 10.0kb downstream 10.0kb downstream 25356 true Chr03: 4764803-4790158 Sorghum bicolor
Sobic.003G052800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 4780159-4790158 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191000 5267 Panicoideae View MSA
124585241 5269 Grass View MSA
122044820 5273 Angiosperm View MSA
121344294 5274 Embryophyte View MSA
123424915 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.151       Low
cufflinks 0.829       Low
cufflinks 1.666        
cufflinks 1.606        
cufflinks 5.138       High
cufflinks 1.824        
cufflinks 2.558        
cufflinks 2.069        
cufflinks 4.154        
cufflinks 4.053        
cufflinks 3.083        
cufflinks 3.367        
cufflinks 3.18        
cufflinks 2.884        
cufflinks 3.581        
cufflinks 1.227       Low
cufflinks 2.241        
cufflinks 2.574        
cufflinks 1.659        
cufflinks 2.725        
cufflinks 6.99       High
cufflinks 3.187        
cufflinks 2.842        
cufflinks 2.98        
cufflinks 1.465       Low
cufflinks 1.54       Low
cufflinks 3.644        
cufflinks 1.401       Low
cufflinks 2.36        
cufflinks 4.231       High

0 Strain