Gene : Sobic.003G052500 S. bicolor v3.1.1
Defline:  (1 of 1) K02699 - photosystem I subunit XI (psaL) Genomic Order:  547
Name:  ? Sobic.003G052500 Secondary Identifier:  ? PAC:37912626
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G052500 0.5kb upstream 0.5kb upstream 1702 true Chr03: 4731408-4733109 Sorghum bicolor
Sobic.003G052500 0.5kb upstream 0.5kb upstream 500 false Chr03: 4732610-4733109 Sorghum bicolor
Sobic.003G052500 0.5kb downstream 0.5kb downstream 1702 true Chr03: 4730908-4732609 Sorghum bicolor
Sobic.003G052500 0.5kb downstream 0.5kb downstream 500 false Chr03: 4730908-4731407 Sorghum bicolor
Sobic.003G052500 1.0kb upstream 1.0kb upstream 2202 true Chr03: 4731408-4733609 Sorghum bicolor
Sobic.003G052500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 4732610-4733609 Sorghum bicolor
Sobic.003G052500 1.0kb downstream 1.0kb downstream 2202 true Chr03: 4730408-4732609 Sorghum bicolor
Sobic.003G052500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 4730408-4731407 Sorghum bicolor
Sobic.003G052500 2.0kb upstream 2.0kb upstream 3202 true Chr03: 4731408-4734609 Sorghum bicolor
Sobic.003G052500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 4732610-4734609 Sorghum bicolor
Sobic.003G052500 2.0kb downstream 2.0kb downstream 3202 true Chr03: 4729408-4732609 Sorghum bicolor
Sobic.003G052500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 4729408-4731407 Sorghum bicolor
Sobic.003G052500 5.0kb upstream 5.0kb upstream 6202 true Chr03: 4731408-4737609 Sorghum bicolor
Sobic.003G052500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 4732610-4737609 Sorghum bicolor
Sobic.003G052500 5.0kb downstream 5.0kb downstream 6202 true Chr03: 4726408-4732609 Sorghum bicolor
Sobic.003G052500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 4726408-4731407 Sorghum bicolor
Sobic.003G052500 10.0kb upstream 10.0kb upstream 11202 true Chr03: 4731408-4742609 Sorghum bicolor
Sobic.003G052500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 4732610-4742609 Sorghum bicolor
Sobic.003G052500 10.0kb downstream 10.0kb downstream 11202 true Chr03: 4721408-4732609 Sorghum bicolor
Sobic.003G052500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 4721408-4731407 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040995 5273 Angiosperm View MSA
122194605 5267 Panicoideae View MSA
124570488 5269 Grass View MSA
121343870 5274 Embryophyte View MSA
123424325 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.491        
cufflinks 1983.822     High High
cufflinks 321.917     High  
cufflinks 236.242     High  
cufflinks 4.594        
cufflinks 125.568     High  
cufflinks 567.171     High High
cufflinks 2811.47     High High
cufflinks 7.195        
cufflinks 4.552        
cufflinks 1.448        
cufflinks 0.565       Low
cufflinks 10.527        
cufflinks 0.708       Low
cufflinks 65.536     High  
cufflinks 1232.216     High High
cufflinks 624.378     High High
cufflinks 467.489     High High
cufflinks 555.004     High High
cufflinks 321.535     High  
cufflinks 3.359        
cufflinks 0.349       Low
cufflinks 0.179       Low
cufflinks 1.097        
cufflinks 769.189     High High
cufflinks 2472.635     High High
cufflinks 0.102       Low
cufflinks 0.225       Low
cufflinks 732.659     High High
cufflinks 45.527     High  

0 Strain