Gene : Sobic.003G059000 S. bicolor v3.1.1
Defline:  (1 of 30) PF01190 - Pollen proteins Ole e I like (Pollen_Ole_e_I) Genomic Order:  614
Name:  ? Sobic.003G059000 Secondary Identifier:  ? PAC:37914406
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G059000 0.5kb upstream 0.5kb upstream 1422 true Chr03: 5185172-5186593 Sorghum bicolor
Sobic.003G059000 0.5kb upstream 0.5kb upstream 500 false Chr03: 5185172-5185671 Sorghum bicolor
Sobic.003G059000 0.5kb downstream 0.5kb downstream 1422 true Chr03: 5185672-5187093 Sorghum bicolor
Sobic.003G059000 0.5kb downstream 0.5kb downstream 500 false Chr03: 5186594-5187093 Sorghum bicolor
Sobic.003G059000 1.0kb upstream 1.0kb upstream 1922 true Chr03: 5184672-5186593 Sorghum bicolor
Sobic.003G059000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 5184672-5185671 Sorghum bicolor
Sobic.003G059000 1.0kb downstream 1.0kb downstream 1922 true Chr03: 5185672-5187593 Sorghum bicolor
Sobic.003G059000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 5186594-5187593 Sorghum bicolor
Sobic.003G059000 2.0kb upstream 2.0kb upstream 2922 true Chr03: 5183672-5186593 Sorghum bicolor
Sobic.003G059000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 5183672-5185671 Sorghum bicolor
Sobic.003G059000 2.0kb downstream 2.0kb downstream 2922 true Chr03: 5185672-5188593 Sorghum bicolor
Sobic.003G059000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 5186594-5188593 Sorghum bicolor
Sobic.003G059000 5.0kb upstream 5.0kb upstream 5922 true Chr03: 5180672-5186593 Sorghum bicolor
Sobic.003G059000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 5180672-5185671 Sorghum bicolor
Sobic.003G059000 5.0kb downstream 5.0kb downstream 5922 true Chr03: 5185672-5191593 Sorghum bicolor
Sobic.003G059000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 5186594-5191593 Sorghum bicolor
Sobic.003G059000 10.0kb upstream 10.0kb upstream 10922 true Chr03: 5175672-5186593 Sorghum bicolor
Sobic.003G059000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 5175672-5185671 Sorghum bicolor
Sobic.003G059000 10.0kb downstream 10.0kb downstream 10922 true Chr03: 5185672-5196593 Sorghum bicolor
Sobic.003G059000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 5186594-5196593 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184335 5267 Panicoideae View MSA
124583602 5269 Grass View MSA
122047345 5273 Angiosperm View MSA
121310733 5274 Embryophyte View MSA
123348146 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.103        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low Low
cufflinks 0.108        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.597        
cufflinks 4.228        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.723        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 10.356       High
cufflinks 7.124        
cufflinks 6.631        
cufflinks 0.015     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.343        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain