Gene : Sobic.003G061800 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR10909:SF331 - ACYL-COENZYME A OXIDASE 4, PEROXISOMAL Genomic Order:  642
Name:  ? Sobic.003G061800 Secondary Identifier:  ? PAC:37918566
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6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-5136 Sorghum bicolor pathologic  
Sbicolor PWY-561 Sorghum bicolor pathologic  
Sbicolor PWY-6837 Sorghum bicolor pathologic  
Sbicolor PWY-735 Sorghum bicolor pathologic  
Sbicolor PWY-7606 Sorghum bicolor pathologic  
Sbicolor PWY-7726 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G061800 0.5kb upstream 0.5kb upstream 5843 true Chr03: 5405579-5411421 Sorghum bicolor
Sobic.003G061800 0.5kb upstream 0.5kb upstream 500 false Chr03: 5405579-5406078 Sorghum bicolor
Sobic.003G061800 0.5kb downstream 0.5kb downstream 5843 true Chr03: 5406079-5411921 Sorghum bicolor
Sobic.003G061800 0.5kb downstream 0.5kb downstream 500 false Chr03: 5411422-5411921 Sorghum bicolor
Sobic.003G061800 1.0kb upstream 1.0kb upstream 6343 true Chr03: 5405079-5411421 Sorghum bicolor
Sobic.003G061800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 5405079-5406078 Sorghum bicolor
Sobic.003G061800 1.0kb downstream 1.0kb downstream 6343 true Chr03: 5406079-5412421 Sorghum bicolor
Sobic.003G061800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 5411422-5412421 Sorghum bicolor
Sobic.003G061800 2.0kb upstream 2.0kb upstream 7343 true Chr03: 5404079-5411421 Sorghum bicolor
Sobic.003G061800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 5404079-5406078 Sorghum bicolor
Sobic.003G061800 2.0kb downstream 2.0kb downstream 7343 true Chr03: 5406079-5413421 Sorghum bicolor
Sobic.003G061800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 5411422-5413421 Sorghum bicolor
Sobic.003G061800 5.0kb upstream 5.0kb upstream 10343 true Chr03: 5401079-5411421 Sorghum bicolor
Sobic.003G061800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 5401079-5406078 Sorghum bicolor
Sobic.003G061800 5.0kb downstream 5.0kb downstream 10343 true Chr03: 5406079-5416421 Sorghum bicolor
Sobic.003G061800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 5411422-5416421 Sorghum bicolor
Sobic.003G061800 10.0kb upstream 10.0kb upstream 15343 true Chr03: 5396079-5411421 Sorghum bicolor
Sobic.003G061800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 5396079-5406078 Sorghum bicolor
Sobic.003G061800 10.0kb downstream 10.0kb downstream 15343 true Chr03: 5406079-5421421 Sorghum bicolor
Sobic.003G061800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 5411422-5421421 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190295 5267 Panicoideae View MSA
124573207 5269 Grass View MSA
122043325 5273 Angiosperm View MSA
121347950 5274 Embryophyte View MSA
123424845 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.499       High
cufflinks 0.244       Low
cufflinks 0.83        
cufflinks 2.642       High
cufflinks 1.63        
cufflinks 1.738        
cufflinks 1.122        
cufflinks 0.779        
cufflinks 3.521       High
cufflinks 3.842       High
cufflinks 1.846        
cufflinks 2.389        
cufflinks 1.459        
cufflinks 2.381        
cufflinks 0.765        
cufflinks 0.535       Low
cufflinks 0.95        
cufflinks 1.071        
cufflinks 0.623       Low
cufflinks 1.232        
cufflinks 2.555        
cufflinks 1.484        
cufflinks 1.34        
cufflinks 1.479        
cufflinks 0.582       Low
cufflinks 0.349       Low
cufflinks 3.588       High
cufflinks 4.365       High
cufflinks 1.501        
cufflinks 0.655       Low

0 Strain