Gene : Sobic.003G126300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12917:SF11 - RHOMBOID DOMAIN-CONTAINING PROTEIN 2 Genomic Order:  1318
Name:  ? Sobic.003G126300 Secondary Identifier:  ? PAC:37914481
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G126300 0.5kb upstream 0.5kb upstream 7055 true Chr03: 11589120-11596174 Sorghum bicolor
Sobic.003G126300 0.5kb upstream 0.5kb upstream 500 false Chr03: 11589120-11589619 Sorghum bicolor
Sobic.003G126300 0.5kb downstream 0.5kb downstream 7055 true Chr03: 11589620-11596674 Sorghum bicolor
Sobic.003G126300 0.5kb downstream 0.5kb downstream 500 false Chr03: 11596175-11596674 Sorghum bicolor
Sobic.003G126300 1.0kb upstream 1.0kb upstream 7555 true Chr03: 11588620-11596174 Sorghum bicolor
Sobic.003G126300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 11588620-11589619 Sorghum bicolor
Sobic.003G126300 1.0kb downstream 1.0kb downstream 7555 true Chr03: 11589620-11597174 Sorghum bicolor
Sobic.003G126300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 11596175-11597174 Sorghum bicolor
Sobic.003G126300 2.0kb upstream 2.0kb upstream 8555 true Chr03: 11587620-11596174 Sorghum bicolor
Sobic.003G126300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 11587620-11589619 Sorghum bicolor
Sobic.003G126300 2.0kb downstream 2.0kb downstream 8555 true Chr03: 11589620-11598174 Sorghum bicolor
Sobic.003G126300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 11596175-11598174 Sorghum bicolor
Sobic.003G126300 5.0kb upstream 5.0kb upstream 11555 true Chr03: 11584620-11596174 Sorghum bicolor
Sobic.003G126300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11584620-11589619 Sorghum bicolor
Sobic.003G126300 5.0kb downstream 5.0kb downstream 11555 true Chr03: 11589620-11601174 Sorghum bicolor
Sobic.003G126300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 11596175-11601174 Sorghum bicolor
Sobic.003G126300 10.0kb upstream 10.0kb upstream 16555 true Chr03: 11579620-11596174 Sorghum bicolor
Sobic.003G126300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11579620-11589619 Sorghum bicolor
Sobic.003G126300 10.0kb downstream 10.0kb downstream 16555 true Chr03: 11589620-11606174 Sorghum bicolor
Sobic.003G126300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 11596175-11606174 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195908 5267 Panicoideae View MSA
124576560 5269 Grass View MSA
122046571 5273 Angiosperm View MSA
121349564 5274 Embryophyte View MSA
123424365 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.038       High
cufflinks 1.719       Low
cufflinks 2.717        
cufflinks 4.271       High
cufflinks 1.637       Low
cufflinks 3.51        
cufflinks 1.861        
cufflinks 1.651       Low
cufflinks 4.735       High
cufflinks 5.051       High
cufflinks 2.39        
cufflinks 3.548        
cufflinks 3.568        
cufflinks 2.811        
cufflinks 3.034        
cufflinks 2.581        
cufflinks 1.923        
cufflinks 2.007        
cufflinks 2.711        
cufflinks 3.365        
cufflinks 1.582       Low
cufflinks 2.977        
cufflinks 3.067        
cufflinks 2.762        
cufflinks 2.69        
cufflinks 1.582       Low
cufflinks 2.767        
cufflinks 3.481        
cufflinks 1.749       Low
cufflinks 2.76        

0 Strain