Gene : Sobic.003G128300 S. bicolor v3.1.1
Defline:  (1 of 1) K10686 - ubiquitin-activating enzyme E1 C (UBE1C, UBA3) Genomic Order:  1340
Name:  ? Sobic.003G128300 Secondary Identifier:  ? PAC:37912914
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G128300 0.5kb upstream 0.5kb upstream 7676 true Chr03: 11753917-11761592 Sorghum bicolor
Sobic.003G128300 0.5kb upstream 0.5kb upstream 500 false Chr03: 11761093-11761592 Sorghum bicolor
Sobic.003G128300 0.5kb downstream 0.5kb downstream 7676 true Chr03: 11753417-11761092 Sorghum bicolor
Sobic.003G128300 0.5kb downstream 0.5kb downstream 500 false Chr03: 11753417-11753916 Sorghum bicolor
Sobic.003G128300 1.0kb upstream 1.0kb upstream 8176 true Chr03: 11753917-11762092 Sorghum bicolor
Sobic.003G128300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 11761093-11762092 Sorghum bicolor
Sobic.003G128300 1.0kb downstream 1.0kb downstream 8176 true Chr03: 11752917-11761092 Sorghum bicolor
Sobic.003G128300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 11752917-11753916 Sorghum bicolor
Sobic.003G128300 2.0kb upstream 2.0kb upstream 9176 true Chr03: 11753917-11763092 Sorghum bicolor
Sobic.003G128300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 11761093-11763092 Sorghum bicolor
Sobic.003G128300 2.0kb downstream 2.0kb downstream 9176 true Chr03: 11751917-11761092 Sorghum bicolor
Sobic.003G128300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 11751917-11753916 Sorghum bicolor
Sobic.003G128300 5.0kb upstream 5.0kb upstream 12176 true Chr03: 11753917-11766092 Sorghum bicolor
Sobic.003G128300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11761093-11766092 Sorghum bicolor
Sobic.003G128300 5.0kb downstream 5.0kb downstream 12176 true Chr03: 11748917-11761092 Sorghum bicolor
Sobic.003G128300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 11748917-11753916 Sorghum bicolor
Sobic.003G128300 10.0kb upstream 10.0kb upstream 17176 true Chr03: 11753917-11771092 Sorghum bicolor
Sobic.003G128300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11761093-11771092 Sorghum bicolor
Sobic.003G128300 10.0kb downstream 10.0kb downstream 17176 true Chr03: 11743917-11761092 Sorghum bicolor
Sobic.003G128300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 11743917-11753916 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186033 5267 Panicoideae View MSA
124575530 5269 Grass View MSA
122047058 5273 Angiosperm View MSA
121346595 5274 Embryophyte View MSA
123424978 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.607       High
cufflinks 1.2       Low
cufflinks 4.006        
cufflinks 6.737        
cufflinks 8.248        
cufflinks 6.189        
cufflinks 4.78        
cufflinks 1.721       Low
cufflinks 8.719        
cufflinks 9.77       High
cufflinks 5.174        
cufflinks 5.241        
cufflinks 7.923        
cufflinks 5.311        
cufflinks 7.92        
cufflinks 3.573        
cufflinks 5.084        
cufflinks 5.764        
cufflinks 2.641       Low
cufflinks 5.917        
cufflinks 13.753       High
cufflinks 6.393        
cufflinks 6.056        
cufflinks 5.77        
cufflinks 1.921       Low
cufflinks 1.019       Low
cufflinks 6.247        
cufflinks 6.128        
cufflinks 4.595        
cufflinks 10.159       High

0 Strain