Gene : Sobic.003G134400 S. bicolor v3.1.1
Defline:  Predicted protein Genomic Order:  1405
Name:  ? Sobic.003G134400 Secondary Identifier:  ? PAC:37915148
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G134400 0.5kb upstream 0.5kb upstream 2994 true Chr03: 12673619-12676612 Sorghum bicolor
Sobic.003G134400 0.5kb upstream 0.5kb upstream 500 false Chr03: 12676113-12676612 Sorghum bicolor
Sobic.003G134400 0.5kb downstream 0.5kb downstream 2994 true Chr03: 12673119-12676112 Sorghum bicolor
Sobic.003G134400 0.5kb downstream 0.5kb downstream 500 false Chr03: 12673119-12673618 Sorghum bicolor
Sobic.003G134400 1.0kb upstream 1.0kb upstream 3494 true Chr03: 12673619-12677112 Sorghum bicolor
Sobic.003G134400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 12676113-12677112 Sorghum bicolor
Sobic.003G134400 1.0kb downstream 1.0kb downstream 3494 true Chr03: 12672619-12676112 Sorghum bicolor
Sobic.003G134400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 12672619-12673618 Sorghum bicolor
Sobic.003G134400 2.0kb upstream 2.0kb upstream 4494 true Chr03: 12673619-12678112 Sorghum bicolor
Sobic.003G134400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 12676113-12678112 Sorghum bicolor
Sobic.003G134400 2.0kb downstream 2.0kb downstream 4494 true Chr03: 12671619-12676112 Sorghum bicolor
Sobic.003G134400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 12671619-12673618 Sorghum bicolor
Sobic.003G134400 5.0kb upstream 5.0kb upstream 7494 true Chr03: 12673619-12681112 Sorghum bicolor
Sobic.003G134400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 12676113-12681112 Sorghum bicolor
Sobic.003G134400 5.0kb downstream 5.0kb downstream 7494 true Chr03: 12668619-12676112 Sorghum bicolor
Sobic.003G134400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 12668619-12673618 Sorghum bicolor
Sobic.003G134400 10.0kb upstream 10.0kb upstream 12494 true Chr03: 12673619-12686112 Sorghum bicolor
Sobic.003G134400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 12676113-12686112 Sorghum bicolor
Sobic.003G134400 10.0kb downstream 10.0kb downstream 12494 true Chr03: 12663619-12676112 Sorghum bicolor
Sobic.003G134400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 12663619-12673618 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187619 5267 Panicoideae View MSA
124577934 5269 Grass View MSA
122050625 5273 Angiosperm View MSA
121312034 5274 Embryophyte View MSA
123349247 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.251        
cufflinks 9.41     High High
cufflinks 3.91        
cufflinks 2.208        
cufflinks 1.335        
cufflinks 1.909        
cufflinks 5.275       High
cufflinks 7.112       High
cufflinks 2.689        
cufflinks 4.133        
cufflinks 1.189        
cufflinks 1.431        
cufflinks 1.62        
cufflinks 0.816       Low
cufflinks 4.188        
cufflinks 4.823        
cufflinks 2.966        
cufflinks 2.565        
cufflinks 7.145       High
cufflinks 2.04        
cufflinks 0.478       Low
cufflinks 1.793        
cufflinks 0.992       Low
cufflinks 0.686       Low
cufflinks 5.763       High
cufflinks 4.653        
cufflinks 0.655       Low
cufflinks 0.602       Low
cufflinks 4.643        
cufflinks 2.497        

0 Strain