Gene : Sobic.003G146800 S. bicolor v3.1.1
Defline:  (1 of 2) 2.5.1.15 - Dihydropteroate synthase / Dihydropteroate pyrophosphorylase Genomic Order:  1536
Name:  ? Sobic.003G146800 Secondary Identifier:  ? PAC:37916024
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6147 Sorghum bicolor pathologic  
Sbicolor PWY-6612 Sorghum bicolor pathologic  
Sbicolor PWY-6614 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G146800 0.5kb upstream 0.5kb upstream 9471 true Chr03: 15160166-15169636 Sorghum bicolor
Sobic.003G146800 0.5kb upstream 0.5kb upstream 500 false Chr03: 15169137-15169636 Sorghum bicolor
Sobic.003G146800 0.5kb downstream 0.5kb downstream 9471 true Chr03: 15159666-15169136 Sorghum bicolor
Sobic.003G146800 0.5kb downstream 0.5kb downstream 500 false Chr03: 15159666-15160165 Sorghum bicolor
Sobic.003G146800 1.0kb upstream 1.0kb upstream 9971 true Chr03: 15160166-15170136 Sorghum bicolor
Sobic.003G146800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 15169137-15170136 Sorghum bicolor
Sobic.003G146800 1.0kb downstream 1.0kb downstream 9971 true Chr03: 15159166-15169136 Sorghum bicolor
Sobic.003G146800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 15159166-15160165 Sorghum bicolor
Sobic.003G146800 2.0kb upstream 2.0kb upstream 10971 true Chr03: 15160166-15171136 Sorghum bicolor
Sobic.003G146800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 15169137-15171136 Sorghum bicolor
Sobic.003G146800 2.0kb downstream 2.0kb downstream 10971 true Chr03: 15158166-15169136 Sorghum bicolor
Sobic.003G146800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 15158166-15160165 Sorghum bicolor
Sobic.003G146800 5.0kb upstream 5.0kb upstream 13971 true Chr03: 15160166-15174136 Sorghum bicolor
Sobic.003G146800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 15169137-15174136 Sorghum bicolor
Sobic.003G146800 5.0kb downstream 5.0kb downstream 13971 true Chr03: 15155166-15169136 Sorghum bicolor
Sobic.003G146800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 15155166-15160165 Sorghum bicolor
Sobic.003G146800 10.0kb upstream 10.0kb upstream 18971 true Chr03: 15160166-15179136 Sorghum bicolor
Sobic.003G146800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 15169137-15179136 Sorghum bicolor
Sobic.003G146800 10.0kb downstream 10.0kb downstream 18971 true Chr03: 15150166-15169136 Sorghum bicolor
Sobic.003G146800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 15150166-15160165 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194312 5267 Panicoideae View MSA
124573700 5269 Grass View MSA
122044899 5273 Angiosperm View MSA
121345768 5274 Embryophyte View MSA
123427891 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.943        
cufflinks 0.057       Low
cufflinks 0.088       Low
cufflinks 0.074       Low
cufflinks 0.493        
cufflinks 0.08     Low Low
cufflinks 0.408        
cufflinks 0.195        
cufflinks 0.153        
cufflinks 0.23        
cufflinks 0.833        
cufflinks 0.709        
cufflinks 0.16        
cufflinks 0.843        
cufflinks 0.306        
cufflinks 0.057     Low Low
cufflinks 0.462        
cufflinks 0.525        
cufflinks 0.059     Low Low
cufflinks 0.338        
cufflinks 0.722        
cufflinks 1.181       High
cufflinks 1.151       High
cufflinks 1.226       High
cufflinks 0.044     Low Low
cufflinks 0.091       Low
cufflinks 0.556        
cufflinks 0.03     Low Low
cufflinks 0.513        
cufflinks 0.686        

0 Strain