Gene : Sobic.003G152800 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR33824//PTHR33824:SF3 - FAMILY NOT NAMED // POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN-RELATED Genomic Order:  1598
Name:  ? Sobic.003G152800 Secondary Identifier:  ? PAC:37916250
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G152800 0.5kb upstream 0.5kb upstream 4025 true Chr03: 16226398-16230422 Sorghum bicolor
Sobic.003G152800 0.5kb upstream 0.5kb upstream 500 false Chr03: 16226398-16226897 Sorghum bicolor
Sobic.003G152800 0.5kb downstream 0.5kb downstream 4025 true Chr03: 16226898-16230922 Sorghum bicolor
Sobic.003G152800 0.5kb downstream 0.5kb downstream 500 false Chr03: 16230423-16230922 Sorghum bicolor
Sobic.003G152800 1.0kb upstream 1.0kb upstream 4525 true Chr03: 16225898-16230422 Sorghum bicolor
Sobic.003G152800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 16225898-16226897 Sorghum bicolor
Sobic.003G152800 1.0kb downstream 1.0kb downstream 4525 true Chr03: 16226898-16231422 Sorghum bicolor
Sobic.003G152800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 16230423-16231422 Sorghum bicolor
Sobic.003G152800 2.0kb upstream 2.0kb upstream 5525 true Chr03: 16224898-16230422 Sorghum bicolor
Sobic.003G152800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 16224898-16226897 Sorghum bicolor
Sobic.003G152800 2.0kb downstream 2.0kb downstream 5525 true Chr03: 16226898-16232422 Sorghum bicolor
Sobic.003G152800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 16230423-16232422 Sorghum bicolor
Sobic.003G152800 5.0kb upstream 5.0kb upstream 8525 true Chr03: 16221898-16230422 Sorghum bicolor
Sobic.003G152800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 16221898-16226897 Sorghum bicolor
Sobic.003G152800 5.0kb downstream 5.0kb downstream 8525 true Chr03: 16226898-16235422 Sorghum bicolor
Sobic.003G152800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 16230423-16235422 Sorghum bicolor
Sobic.003G152800 10.0kb upstream 10.0kb upstream 13525 true Chr03: 16216898-16230422 Sorghum bicolor
Sobic.003G152800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 16216898-16226897 Sorghum bicolor
Sobic.003G152800 10.0kb downstream 10.0kb downstream 13525 true Chr03: 16226898-16240422 Sorghum bicolor
Sobic.003G152800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 16230423-16240422 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191877 5267 Panicoideae View MSA
124578561 5269 Grass View MSA
122046905 5273 Angiosperm View MSA
121345017 5274 Embryophyte View MSA
123427878 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.851       Low
cufflinks 16.535     High High
cufflinks 7.833        
cufflinks 7.008        
cufflinks 2.393       Low
cufflinks 10.363        
cufflinks 5.909        
cufflinks 11.715     High High
cufflinks 3.398       Low
cufflinks 3.275       Low
cufflinks 10.065        
cufflinks 9.813        
cufflinks 5.214        
cufflinks 9.629        
cufflinks 6.198        
cufflinks 15.287     High High
cufflinks 6.278        
cufflinks 6.891        
cufflinks 9.032        
cufflinks 5.317        
cufflinks 2.187       Low
cufflinks 8.821        
cufflinks 9.263        
cufflinks 9.185        
cufflinks 12.298     High High
cufflinks 12.418     High High
cufflinks 8.914        
cufflinks 2.347       Low
cufflinks 8.91        
cufflinks 4.079        

0 Strain