Gene : Sobic.003G107900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31956:SF2 - NON-SPECIFIC PHOSPHOLIPASE C6 Genomic Order:  1124
Name:  ? Sobic.003G107900 Secondary Identifier:  ? PAC:37913366
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor LIPASYN-PWY Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G107900 0.5kb upstream 0.5kb upstream 2859 true Chr03: 9772079-9774937 Sorghum bicolor
Sobic.003G107900 0.5kb upstream 0.5kb upstream 500 false Chr03: 9772079-9772578 Sorghum bicolor
Sobic.003G107900 0.5kb downstream 0.5kb downstream 2859 true Chr03: 9772579-9775437 Sorghum bicolor
Sobic.003G107900 0.5kb downstream 0.5kb downstream 500 false Chr03: 9774938-9775437 Sorghum bicolor
Sobic.003G107900 1.0kb upstream 1.0kb upstream 3359 true Chr03: 9771579-9774937 Sorghum bicolor
Sobic.003G107900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 9771579-9772578 Sorghum bicolor
Sobic.003G107900 1.0kb downstream 1.0kb downstream 3359 true Chr03: 9772579-9775937 Sorghum bicolor
Sobic.003G107900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 9774938-9775937 Sorghum bicolor
Sobic.003G107900 2.0kb upstream 2.0kb upstream 4359 true Chr03: 9770579-9774937 Sorghum bicolor
Sobic.003G107900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 9770579-9772578 Sorghum bicolor
Sobic.003G107900 2.0kb downstream 2.0kb downstream 4359 true Chr03: 9772579-9776937 Sorghum bicolor
Sobic.003G107900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 9774938-9776937 Sorghum bicolor
Sobic.003G107900 5.0kb upstream 5.0kb upstream 7359 true Chr03: 9767579-9774937 Sorghum bicolor
Sobic.003G107900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 9767579-9772578 Sorghum bicolor
Sobic.003G107900 5.0kb downstream 5.0kb downstream 7359 true Chr03: 9772579-9779937 Sorghum bicolor
Sobic.003G107900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 9774938-9779937 Sorghum bicolor
Sobic.003G107900 10.0kb upstream 10.0kb upstream 12359 true Chr03: 9762579-9774937 Sorghum bicolor
Sobic.003G107900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 9762579-9772578 Sorghum bicolor
Sobic.003G107900 10.0kb downstream 10.0kb downstream 12359 true Chr03: 9772579-9784937 Sorghum bicolor
Sobic.003G107900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 9774938-9784937 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184636 5267 Panicoideae View MSA
124577445 5269 Grass View MSA
122046381 5273 Angiosperm View MSA
121310596 5274 Embryophyte View MSA
123348041 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.525       High
cufflinks 0.06       Low
cufflinks 0.061       Low
cufflinks 0.109       Low
cufflinks 9.224       High
cufflinks 0.379        
cufflinks 2.11        
cufflinks 1.367        
cufflinks 0.678        
cufflinks 0.64        
cufflinks 0.796        
cufflinks 0.881        
cufflinks 0.735        
cufflinks 2.739        
cufflinks 0.598        
cufflinks 0.082       Low
cufflinks 2.235        
cufflinks 1.667        
cufflinks 0.792        
cufflinks 1.87        
cufflinks 2.342        
cufflinks 2.374        
cufflinks 1.146        
cufflinks 1.195        
cufflinks 0.162       Low
cufflinks 0.231       Low
cufflinks 0.303       Low
cufflinks 3.639        
cufflinks 5.432       High
cufflinks 1.56        

0 Strain