Gene : Sobic.003G109500 S. bicolor v3.1.1
Defline:  (1 of 5) PF07889 - Protein of unknown function (DUF1664) (DUF1664) Genomic Order:  1143
Name:  ? Sobic.003G109500 Secondary Identifier:  ? PAC:37918753
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G109500 0.5kb upstream 0.5kb upstream 5798 true Chr03: 9880628-9886425 Sorghum bicolor
Sobic.003G109500 0.5kb upstream 0.5kb upstream 500 false Chr03: 9885926-9886425 Sorghum bicolor
Sobic.003G109500 0.5kb downstream 0.5kb downstream 5798 true Chr03: 9880128-9885925 Sorghum bicolor
Sobic.003G109500 0.5kb downstream 0.5kb downstream 500 false Chr03: 9880128-9880627 Sorghum bicolor
Sobic.003G109500 1.0kb upstream 1.0kb upstream 6298 true Chr03: 9880628-9886925 Sorghum bicolor
Sobic.003G109500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 9885926-9886925 Sorghum bicolor
Sobic.003G109500 1.0kb downstream 1.0kb downstream 6298 true Chr03: 9879628-9885925 Sorghum bicolor
Sobic.003G109500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 9879628-9880627 Sorghum bicolor
Sobic.003G109500 2.0kb upstream 2.0kb upstream 7298 true Chr03: 9880628-9887925 Sorghum bicolor
Sobic.003G109500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 9885926-9887925 Sorghum bicolor
Sobic.003G109500 2.0kb downstream 2.0kb downstream 7298 true Chr03: 9878628-9885925 Sorghum bicolor
Sobic.003G109500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 9878628-9880627 Sorghum bicolor
Sobic.003G109500 5.0kb upstream 5.0kb upstream 10298 true Chr03: 9880628-9890925 Sorghum bicolor
Sobic.003G109500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 9885926-9890925 Sorghum bicolor
Sobic.003G109500 5.0kb downstream 5.0kb downstream 10298 true Chr03: 9875628-9885925 Sorghum bicolor
Sobic.003G109500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 9875628-9880627 Sorghum bicolor
Sobic.003G109500 10.0kb upstream 10.0kb upstream 15298 true Chr03: 9880628-9895925 Sorghum bicolor
Sobic.003G109500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 9885926-9895925 Sorghum bicolor
Sobic.003G109500 10.0kb downstream 10.0kb downstream 15298 true Chr03: 9870628-9885925 Sorghum bicolor
Sobic.003G109500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 9870628-9880627 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197334 5267 Panicoideae View MSA
124580264 5269 Grass View MSA
122042412 5273 Angiosperm View MSA
121350785 5274 Embryophyte View MSA
123428058 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.377     High High
cufflinks 7.792     High  
cufflinks 15.741     High High
cufflinks 19.325     High High
cufflinks 8.196        
cufflinks 24.296     High High
cufflinks 9.19        
cufflinks 5.952       Low
cufflinks 17.148     High High
cufflinks 18.675     High High
cufflinks 6.788       Low
cufflinks 7.677        
cufflinks 14.466     High  
cufflinks 7.641        
cufflinks 10.835        
cufflinks 12.978     High  
cufflinks 9.117        
cufflinks 10.481        
cufflinks 14.898     High High
cufflinks 12.016     High  
cufflinks 12.727        
cufflinks 8.513        
cufflinks 8.49        
cufflinks 8.434        
cufflinks 9.778     High  
cufflinks 6.538     High Low
cufflinks 8.45        
cufflinks 11.717     High  
cufflinks 7.79        
cufflinks 10.149        

0 Strain