Gene : Sobic.003G122400 S. bicolor v3.1.1
Defline:  (1 of 1) PF14966 - DNA repair REX1-B (DNA_repr_REX1B) Genomic Order:  1279
Name:  ? Sobic.003G122400 Secondary Identifier:  ? PAC:37914238
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G122400 0.5kb upstream 0.5kb upstream 4075 true Chr03: 11138624-11142698 Sorghum bicolor
Sobic.003G122400 0.5kb upstream 0.5kb upstream 500 false Chr03: 11142199-11142698 Sorghum bicolor
Sobic.003G122400 0.5kb downstream 0.5kb downstream 4075 true Chr03: 11138124-11142198 Sorghum bicolor
Sobic.003G122400 0.5kb downstream 0.5kb downstream 500 false Chr03: 11138124-11138623 Sorghum bicolor
Sobic.003G122400 1.0kb upstream 1.0kb upstream 4575 true Chr03: 11138624-11143198 Sorghum bicolor
Sobic.003G122400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 11142199-11143198 Sorghum bicolor
Sobic.003G122400 1.0kb downstream 1.0kb downstream 4575 true Chr03: 11137624-11142198 Sorghum bicolor
Sobic.003G122400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 11137624-11138623 Sorghum bicolor
Sobic.003G122400 2.0kb upstream 2.0kb upstream 5575 true Chr03: 11138624-11144198 Sorghum bicolor
Sobic.003G122400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 11142199-11144198 Sorghum bicolor
Sobic.003G122400 2.0kb downstream 2.0kb downstream 5575 true Chr03: 11136624-11142198 Sorghum bicolor
Sobic.003G122400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 11136624-11138623 Sorghum bicolor
Sobic.003G122400 5.0kb upstream 5.0kb upstream 8575 true Chr03: 11138624-11147198 Sorghum bicolor
Sobic.003G122400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11142199-11147198 Sorghum bicolor
Sobic.003G122400 5.0kb downstream 5.0kb downstream 8575 true Chr03: 11133624-11142198 Sorghum bicolor
Sobic.003G122400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 11133624-11138623 Sorghum bicolor
Sobic.003G122400 10.0kb upstream 10.0kb upstream 13575 true Chr03: 11138624-11152198 Sorghum bicolor
Sobic.003G122400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11142199-11152198 Sorghum bicolor
Sobic.003G122400 10.0kb downstream 10.0kb downstream 13575 true Chr03: 11128624-11142198 Sorghum bicolor
Sobic.003G122400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 11128624-11138623 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181404 5267 Panicoideae View MSA
124587389 5269 Grass View MSA
122048656 5273 Angiosperm View MSA
121344631 5274 Embryophyte View MSA
123424475 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.183       High
cufflinks 0.808       Low
cufflinks 1.755        
cufflinks 3.316       High
cufflinks 1.995        
cufflinks 3.016       High
cufflinks 1.585        
cufflinks 0.92       Low
cufflinks 3.116       High
cufflinks 2.935        
cufflinks 1.845        
cufflinks 2.229        
cufflinks 1.93        
cufflinks 1.678        
cufflinks 2.389        
cufflinks 2.712        
cufflinks 2.209        
cufflinks 1.739        
cufflinks 2.101        
cufflinks 2.394        
cufflinks 3.659       High
cufflinks 2.118        
cufflinks 1.966        
cufflinks 1.855        
cufflinks 1.507        
cufflinks 0.793       Low
cufflinks 1.659        
cufflinks 6.459       High
cufflinks 1.027       Low
cufflinks 2.619        

0 Strain