Gene : Sobic.003G188500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12292 - RWD DOMAIN-CONTAINING PROTEIN Genomic Order:  1983
Name:  ? Sobic.003G188500 Secondary Identifier:  ? PAC:37915819
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G188500 0.5kb upstream 0.5kb upstream 3502 true Chr03: 50801526-50805027 Sorghum bicolor
Sobic.003G188500 0.5kb upstream 0.5kb upstream 500 false Chr03: 50804528-50805027 Sorghum bicolor
Sobic.003G188500 0.5kb downstream 0.5kb downstream 3502 true Chr03: 50801026-50804527 Sorghum bicolor
Sobic.003G188500 0.5kb downstream 0.5kb downstream 500 false Chr03: 50801026-50801525 Sorghum bicolor
Sobic.003G188500 1.0kb upstream 1.0kb upstream 4002 true Chr03: 50801526-50805527 Sorghum bicolor
Sobic.003G188500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50804528-50805527 Sorghum bicolor
Sobic.003G188500 1.0kb downstream 1.0kb downstream 4002 true Chr03: 50800526-50804527 Sorghum bicolor
Sobic.003G188500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50800526-50801525 Sorghum bicolor
Sobic.003G188500 2.0kb upstream 2.0kb upstream 5002 true Chr03: 50801526-50806527 Sorghum bicolor
Sobic.003G188500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50804528-50806527 Sorghum bicolor
Sobic.003G188500 2.0kb downstream 2.0kb downstream 5002 true Chr03: 50799526-50804527 Sorghum bicolor
Sobic.003G188500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50799526-50801525 Sorghum bicolor
Sobic.003G188500 5.0kb upstream 5.0kb upstream 8002 true Chr03: 50801526-50809527 Sorghum bicolor
Sobic.003G188500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50804528-50809527 Sorghum bicolor
Sobic.003G188500 5.0kb downstream 5.0kb downstream 8002 true Chr03: 50796526-50804527 Sorghum bicolor
Sobic.003G188500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50796526-50801525 Sorghum bicolor
Sobic.003G188500 10.0kb upstream 10.0kb upstream 13002 true Chr03: 50801526-50814527 Sorghum bicolor
Sobic.003G188500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50804528-50814527 Sorghum bicolor
Sobic.003G188500 10.0kb downstream 10.0kb downstream 13002 true Chr03: 50791526-50804527 Sorghum bicolor
Sobic.003G188500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50791526-50801525 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041023 5273 Angiosperm View MSA
122181013 5267 Panicoideae View MSA
124569005 5269 Grass View MSA
121346439 5274 Embryophyte View MSA
123425357 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.164     High  
cufflinks 7.446     High Low
cufflinks 20.606     High  
cufflinks 30.429     High High
cufflinks 24.918     High  
cufflinks 32.882     High High
cufflinks 11.765     High Low
cufflinks 6.621       Low
cufflinks 28.677     High  
cufflinks 29.461     High High
cufflinks 16.024     High  
cufflinks 14.827     High  
cufflinks 23.73     High  
cufflinks 15.085     High  
cufflinks 23.012     High  
cufflinks 17.946     High  
cufflinks 12.373     High  
cufflinks 14.067     High  
cufflinks 17.159     High  
cufflinks 18.112     High  
cufflinks 27.83     High  
cufflinks 19.534     High  
cufflinks 17.388     High  
cufflinks 17.211     High  
cufflinks 10.74     High Low
cufflinks 5.167       Low
cufflinks 24.136     High  
cufflinks 48.986     High High
cufflinks 12.553     High  
cufflinks 28.406     High  

0 Strain