Gene : Sobic.003G187800 S. bicolor v3.1.1
Defline:  (1 of 1) 1.14.19.4 - Delta(8)-fatty-acid desaturase / SLD Genomic Order:  1977
Name:  ? Sobic.003G187800 Secondary Identifier:  ? PAC:37918454
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7601 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G187800 0.5kb upstream 0.5kb upstream 2611 true Chr03: 50670830-50673440 Sorghum bicolor
Sobic.003G187800 0.5kb upstream 0.5kb upstream 500 false Chr03: 50670830-50671329 Sorghum bicolor
Sobic.003G187800 0.5kb downstream 0.5kb downstream 2611 true Chr03: 50671330-50673940 Sorghum bicolor
Sobic.003G187800 0.5kb downstream 0.5kb downstream 500 false Chr03: 50673441-50673940 Sorghum bicolor
Sobic.003G187800 1.0kb upstream 1.0kb upstream 3111 true Chr03: 50670330-50673440 Sorghum bicolor
Sobic.003G187800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50670330-50671329 Sorghum bicolor
Sobic.003G187800 1.0kb downstream 1.0kb downstream 3111 true Chr03: 50671330-50674440 Sorghum bicolor
Sobic.003G187800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50673441-50674440 Sorghum bicolor
Sobic.003G187800 2.0kb upstream 2.0kb upstream 4111 true Chr03: 50669330-50673440 Sorghum bicolor
Sobic.003G187800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50669330-50671329 Sorghum bicolor
Sobic.003G187800 2.0kb downstream 2.0kb downstream 4111 true Chr03: 50671330-50675440 Sorghum bicolor
Sobic.003G187800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50673441-50675440 Sorghum bicolor
Sobic.003G187800 5.0kb upstream 5.0kb upstream 7111 true Chr03: 50666330-50673440 Sorghum bicolor
Sobic.003G187800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50666330-50671329 Sorghum bicolor
Sobic.003G187800 5.0kb downstream 5.0kb downstream 7111 true Chr03: 50671330-50678440 Sorghum bicolor
Sobic.003G187800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50673441-50678440 Sorghum bicolor
Sobic.003G187800 10.0kb upstream 10.0kb upstream 12111 true Chr03: 50661330-50673440 Sorghum bicolor
Sobic.003G187800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50661330-50671329 Sorghum bicolor
Sobic.003G187800 10.0kb downstream 10.0kb downstream 12111 true Chr03: 50671330-50683440 Sorghum bicolor
Sobic.003G187800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50673441-50683440 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047499 5273 Angiosperm View MSA
122192094 5267 Panicoideae View MSA
124466254 5269 Grass View MSA
121347259 5274 Embryophyte View MSA
123427370 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.212        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.14        
cufflinks 0.157        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.243        
cufflinks 0.107        
cufflinks 0.015     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low Low
cufflinks 0.772       High
cufflinks 0.242        
cufflinks 0.229        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.058     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.481       High

0 Strain