Gene : Sobic.003G190500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11014:SF55 - IAA-AMINO ACID HYDROLASE ILR1-LIKE 1-RELATED Genomic Order:  2002
Name:  ? Sobic.003G190500 Secondary Identifier:  ? PAC:37916682
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G190500 0.5kb upstream 0.5kb upstream 5730 true Chr03: 51167150-51172879 Sorghum bicolor
Sobic.003G190500 0.5kb upstream 0.5kb upstream 500 false Chr03: 51172380-51172879 Sorghum bicolor
Sobic.003G190500 0.5kb downstream 0.5kb downstream 5730 true Chr03: 51166650-51172379 Sorghum bicolor
Sobic.003G190500 0.5kb downstream 0.5kb downstream 500 false Chr03: 51166650-51167149 Sorghum bicolor
Sobic.003G190500 1.0kb upstream 1.0kb upstream 6230 true Chr03: 51167150-51173379 Sorghum bicolor
Sobic.003G190500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 51172380-51173379 Sorghum bicolor
Sobic.003G190500 1.0kb downstream 1.0kb downstream 6230 true Chr03: 51166150-51172379 Sorghum bicolor
Sobic.003G190500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 51166150-51167149 Sorghum bicolor
Sobic.003G190500 2.0kb upstream 2.0kb upstream 7230 true Chr03: 51167150-51174379 Sorghum bicolor
Sobic.003G190500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 51172380-51174379 Sorghum bicolor
Sobic.003G190500 2.0kb downstream 2.0kb downstream 7230 true Chr03: 51165150-51172379 Sorghum bicolor
Sobic.003G190500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 51165150-51167149 Sorghum bicolor
Sobic.003G190500 5.0kb upstream 5.0kb upstream 10230 true Chr03: 51167150-51177379 Sorghum bicolor
Sobic.003G190500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 51172380-51177379 Sorghum bicolor
Sobic.003G190500 5.0kb downstream 5.0kb downstream 10230 true Chr03: 51162150-51172379 Sorghum bicolor
Sobic.003G190500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 51162150-51167149 Sorghum bicolor
Sobic.003G190500 10.0kb upstream 10.0kb upstream 15230 true Chr03: 51167150-51182379 Sorghum bicolor
Sobic.003G190500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 51172380-51182379 Sorghum bicolor
Sobic.003G190500 10.0kb downstream 10.0kb downstream 15230 true Chr03: 51157150-51172379 Sorghum bicolor
Sobic.003G190500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 51157150-51167149 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188380 5267 Panicoideae View MSA
124574004 5269 Grass View MSA
122042438 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.484     High High
cufflinks 6.928     High  
cufflinks 3.647       Low
cufflinks 4.483       Low
cufflinks 7.135        
cufflinks 6.832        
cufflinks 7.82        
cufflinks 8.868     High  
cufflinks 8.942        
cufflinks 7.835        
cufflinks 11.339        
cufflinks 11.765     High  
cufflinks 7.749        
cufflinks 17.247     High High
cufflinks 7.72        
cufflinks 8.698        
cufflinks 8.977        
cufflinks 8.144        
cufflinks 6.938        
cufflinks 9.736        
cufflinks 8.371        
cufflinks 11.746     High  
cufflinks 11.665     High  
cufflinks 11.945     High  
cufflinks 7.802        
cufflinks 7.981     High  
cufflinks 9.724        
cufflinks 21.754     High High
cufflinks 8.966        
cufflinks 6.78        

0 Strain