Gene : Sobic.003G191000 S. bicolor v3.1.1
Defline:  (1 of 2) K03146 - thiamine thiazole synthase (THI4, THI1) Genomic Order:  2007
Name:  ? Sobic.003G191000 Secondary Identifier:  ? PAC:37917965
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G191000 0.5kb upstream 0.5kb upstream 2092 true Chr03: 51236002-51238093 Sorghum bicolor
Sobic.003G191000 0.5kb upstream 0.5kb upstream 500 false Chr03: 51237594-51238093 Sorghum bicolor
Sobic.003G191000 0.5kb downstream 0.5kb downstream 2092 true Chr03: 51235502-51237593 Sorghum bicolor
Sobic.003G191000 0.5kb downstream 0.5kb downstream 500 false Chr03: 51235502-51236001 Sorghum bicolor
Sobic.003G191000 1.0kb upstream 1.0kb upstream 2592 true Chr03: 51236002-51238593 Sorghum bicolor
Sobic.003G191000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 51237594-51238593 Sorghum bicolor
Sobic.003G191000 1.0kb downstream 1.0kb downstream 2592 true Chr03: 51235002-51237593 Sorghum bicolor
Sobic.003G191000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 51235002-51236001 Sorghum bicolor
Sobic.003G191000 2.0kb upstream 2.0kb upstream 3592 true Chr03: 51236002-51239593 Sorghum bicolor
Sobic.003G191000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 51237594-51239593 Sorghum bicolor
Sobic.003G191000 2.0kb downstream 2.0kb downstream 3592 true Chr03: 51234002-51237593 Sorghum bicolor
Sobic.003G191000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 51234002-51236001 Sorghum bicolor
Sobic.003G191000 5.0kb upstream 5.0kb upstream 6592 true Chr03: 51236002-51242593 Sorghum bicolor
Sobic.003G191000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 51237594-51242593 Sorghum bicolor
Sobic.003G191000 5.0kb downstream 5.0kb downstream 6592 true Chr03: 51231002-51237593 Sorghum bicolor
Sobic.003G191000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 51231002-51236001 Sorghum bicolor
Sobic.003G191000 10.0kb upstream 10.0kb upstream 11592 true Chr03: 51236002-51247593 Sorghum bicolor
Sobic.003G191000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 51237594-51247593 Sorghum bicolor
Sobic.003G191000 10.0kb downstream 10.0kb downstream 11592 true Chr03: 51226002-51237593 Sorghum bicolor
Sobic.003G191000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 51226002-51236001 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185049 5267 Panicoideae View MSA
124573874 5269 Grass View MSA
122045282 5273 Angiosperm View MSA
121346380 5274 Embryophyte View MSA
123423990 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.594        
cufflinks 0.598        
cufflinks 0.108       Low
cufflinks 2.828        
cufflinks 0.091       Low
cufflinks 0.102     Low Low
cufflinks 2.595        
cufflinks 0.766        
cufflinks 57.479     High High
cufflinks 34.086     High High
cufflinks 11.641        
cufflinks 47.86     High High
cufflinks 0.808        
cufflinks 35.356     High High
cufflinks 0.653        
cufflinks 0.17       Low
cufflinks 3.282        
cufflinks 3.255        
cufflinks 0.257        
cufflinks 4.599        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 13.164     High  
cufflinks 14.567     High  
cufflinks 6.736        
cufflinks 0.317        
cufflinks 0.256        
cufflinks 33.471     High High
cufflinks 111.294     High High
cufflinks 1.543        
cufflinks 5.313        

0 Strain