Gene : Sobic.003G193800 S. bicolor v3.1.1
Defline:  similar to Putative calmodulin-binding protein Genomic Order:  2034
Name:  ? Sobic.003G193800 Secondary Identifier:  ? PAC:37917884
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G193800 0.5kb upstream 0.5kb upstream 3302 true Chr03: 51645422-51648723 Sorghum bicolor
Sobic.003G193800 0.5kb upstream 0.5kb upstream 500 false Chr03: 51648224-51648723 Sorghum bicolor
Sobic.003G193800 0.5kb downstream 0.5kb downstream 3302 true Chr03: 51644922-51648223 Sorghum bicolor
Sobic.003G193800 0.5kb downstream 0.5kb downstream 500 false Chr03: 51644922-51645421 Sorghum bicolor
Sobic.003G193800 1.0kb upstream 1.0kb upstream 3802 true Chr03: 51645422-51649223 Sorghum bicolor
Sobic.003G193800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 51648224-51649223 Sorghum bicolor
Sobic.003G193800 1.0kb downstream 1.0kb downstream 3802 true Chr03: 51644422-51648223 Sorghum bicolor
Sobic.003G193800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 51644422-51645421 Sorghum bicolor
Sobic.003G193800 2.0kb upstream 2.0kb upstream 4802 true Chr03: 51645422-51650223 Sorghum bicolor
Sobic.003G193800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 51648224-51650223 Sorghum bicolor
Sobic.003G193800 2.0kb downstream 2.0kb downstream 4802 true Chr03: 51643422-51648223 Sorghum bicolor
Sobic.003G193800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 51643422-51645421 Sorghum bicolor
Sobic.003G193800 5.0kb upstream 5.0kb upstream 7802 true Chr03: 51645422-51653223 Sorghum bicolor
Sobic.003G193800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 51648224-51653223 Sorghum bicolor
Sobic.003G193800 5.0kb downstream 5.0kb downstream 7802 true Chr03: 51640422-51648223 Sorghum bicolor
Sobic.003G193800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 51640422-51645421 Sorghum bicolor
Sobic.003G193800 10.0kb upstream 10.0kb upstream 12802 true Chr03: 51645422-51658223 Sorghum bicolor
Sobic.003G193800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 51648224-51658223 Sorghum bicolor
Sobic.003G193800 10.0kb downstream 10.0kb downstream 12802 true Chr03: 51635422-51648223 Sorghum bicolor
Sobic.003G193800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 51635422-51645421 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184635 5267 Panicoideae View MSA
124569577 5269 Grass View MSA
122041581 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.494     High  
cufflinks 43.657     High  
cufflinks 119.705     High High
cufflinks 83.024     High High
cufflinks 2.876       Low
cufflinks 82.16     High High
cufflinks 6.957        
cufflinks 43.854     High  
cufflinks 39.343     High  
cufflinks 22.803     High  
cufflinks 49.722     High  
cufflinks 5.991        
cufflinks 5.436        
cufflinks 9.228        
cufflinks 14.168     High  
cufflinks 20.516     High  
cufflinks 4.122        
cufflinks 5.25        
cufflinks 83.792     High High
cufflinks 4.929        
cufflinks 0.186       Low
cufflinks 8.592        
cufflinks 5.79        
cufflinks 6.394        
cufflinks 142.606     High High
cufflinks 66.889     High  
cufflinks 81.336     High High
cufflinks 29.204     High  
cufflinks 6.583        
cufflinks 19.166     High  

0 Strain