Gene : Sobic.003G205100 S. bicolor v3.1.1
Defline:  (1 of 1) K11136 - regulator of telomere elongation helicase 1 [EC:3.6.4.12] (RTEL1) Genomic Order:  2154
Name:  ? Sobic.003G205100 Secondary Identifier:  ? PAC:37915885
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G205100 0.5kb upstream 0.5kb upstream 19073 true Chr03: 53482152-53501224 Sorghum bicolor
Sobic.003G205100 0.5kb upstream 0.5kb upstream 500 false Chr03: 53500725-53501224 Sorghum bicolor
Sobic.003G205100 0.5kb downstream 0.5kb downstream 19073 true Chr03: 53481652-53500724 Sorghum bicolor
Sobic.003G205100 0.5kb downstream 0.5kb downstream 500 false Chr03: 53481652-53482151 Sorghum bicolor
Sobic.003G205100 1.0kb upstream 1.0kb upstream 19573 true Chr03: 53482152-53501724 Sorghum bicolor
Sobic.003G205100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 53500725-53501724 Sorghum bicolor
Sobic.003G205100 1.0kb downstream 1.0kb downstream 19573 true Chr03: 53481152-53500724 Sorghum bicolor
Sobic.003G205100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 53481152-53482151 Sorghum bicolor
Sobic.003G205100 2.0kb upstream 2.0kb upstream 20573 true Chr03: 53482152-53502724 Sorghum bicolor
Sobic.003G205100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 53500725-53502724 Sorghum bicolor
Sobic.003G205100 2.0kb downstream 2.0kb downstream 20573 true Chr03: 53480152-53500724 Sorghum bicolor
Sobic.003G205100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 53480152-53482151 Sorghum bicolor
Sobic.003G205100 5.0kb upstream 5.0kb upstream 23573 true Chr03: 53482152-53505724 Sorghum bicolor
Sobic.003G205100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 53500725-53505724 Sorghum bicolor
Sobic.003G205100 5.0kb downstream 5.0kb downstream 23573 true Chr03: 53477152-53500724 Sorghum bicolor
Sobic.003G205100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 53477152-53482151 Sorghum bicolor
Sobic.003G205100 10.0kb upstream 10.0kb upstream 28573 true Chr03: 53482152-53510724 Sorghum bicolor
Sobic.003G205100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 53500725-53510724 Sorghum bicolor
Sobic.003G205100 10.0kb downstream 10.0kb downstream 28573 true Chr03: 53472152-53500724 Sorghum bicolor
Sobic.003G205100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 53472152-53482151 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187773 5267 Panicoideae View MSA
124575235 5269 Grass View MSA
122044733 5273 Angiosperm View MSA
121346490 5274 Embryophyte View MSA
123426390 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.174        
cufflinks 0.023     Low Low
cufflinks 0.106        
cufflinks 0.13        
cufflinks 1.049       High
cufflinks 0.264        
cufflinks 0.397        
cufflinks 0.039     Low Low
cufflinks 0.54        
cufflinks 0.449        
cufflinks 0.41        
cufflinks 0.616        
cufflinks 0.336        
cufflinks 0.408        
cufflinks 0.368        
cufflinks 0.063     Low Low
cufflinks 0.374        
cufflinks 0.423        
cufflinks 0.088     Low Low
cufflinks 0.387        
cufflinks 1.49       High
cufflinks 0.595        
cufflinks 0.504        
cufflinks 0.506        
cufflinks 0.047     Low Low
cufflinks 0.027     Low Low
cufflinks 0.511        
cufflinks 0.017     Low Low
cufflinks 0.124        
cufflinks 0.678        

0 Strain