Gene : Sobic.003G205400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR33284//PTHR33284:SF1 - FAMILY NOT NAMED // RIBOSOMAL L25/TL5/CTC N-TERMINAL 5S RRNA BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  2157
Name:  ? Sobic.003G205400 Secondary Identifier:  ? PAC:37917701
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G205400 0.5kb upstream 0.5kb upstream 3059 true Chr03: 53562233-53565291 Sorghum bicolor
Sobic.003G205400 0.5kb upstream 0.5kb upstream 500 false Chr03: 53564792-53565291 Sorghum bicolor
Sobic.003G205400 0.5kb downstream 0.5kb downstream 3059 true Chr03: 53561733-53564791 Sorghum bicolor
Sobic.003G205400 0.5kb downstream 0.5kb downstream 500 false Chr03: 53561733-53562232 Sorghum bicolor
Sobic.003G205400 1.0kb upstream 1.0kb upstream 3559 true Chr03: 53562233-53565791 Sorghum bicolor
Sobic.003G205400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 53564792-53565791 Sorghum bicolor
Sobic.003G205400 1.0kb downstream 1.0kb downstream 3559 true Chr03: 53561233-53564791 Sorghum bicolor
Sobic.003G205400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 53561233-53562232 Sorghum bicolor
Sobic.003G205400 2.0kb upstream 2.0kb upstream 4559 true Chr03: 53562233-53566791 Sorghum bicolor
Sobic.003G205400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 53564792-53566791 Sorghum bicolor
Sobic.003G205400 2.0kb downstream 2.0kb downstream 4559 true Chr03: 53560233-53564791 Sorghum bicolor
Sobic.003G205400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 53560233-53562232 Sorghum bicolor
Sobic.003G205400 5.0kb upstream 5.0kb upstream 7559 true Chr03: 53562233-53569791 Sorghum bicolor
Sobic.003G205400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 53564792-53569791 Sorghum bicolor
Sobic.003G205400 5.0kb downstream 5.0kb downstream 7559 true Chr03: 53557233-53564791 Sorghum bicolor
Sobic.003G205400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 53557233-53562232 Sorghum bicolor
Sobic.003G205400 10.0kb upstream 10.0kb upstream 12559 true Chr03: 53562233-53574791 Sorghum bicolor
Sobic.003G205400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 53564792-53574791 Sorghum bicolor
Sobic.003G205400 10.0kb downstream 10.0kb downstream 12559 true Chr03: 53552233-53564791 Sorghum bicolor
Sobic.003G205400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 53552233-53562232 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175349 5267 Panicoideae View MSA
124578047 5269 Grass View MSA
122044337 5273 Angiosperm View MSA
121344036 5274 Embryophyte View MSA
123426023 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.04     High High
cufflinks 0.264       Low
cufflinks 0.69       Low
cufflinks 3.334        
cufflinks 5.196        
cufflinks 2.994        
cufflinks 2.466        
cufflinks 0.337       Low
cufflinks 5.479        
cufflinks 5.173        
cufflinks 4.998        
cufflinks 5.56        
cufflinks 2.446        
cufflinks 6.175        
cufflinks 3.066        
cufflinks 0.783       Low
cufflinks 3.269        
cufflinks 3.146        
cufflinks 0.815       Low
cufflinks 3.143        
cufflinks 7.823        
cufflinks 7.833        
cufflinks 7.543        
cufflinks 7.154        
cufflinks 0.442       Low
cufflinks 0.23       Low
cufflinks 3.12        
cufflinks 6.213        
cufflinks 2.187        
cufflinks 5.388        

0 Strain