Gene : Sobic.003G205501 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12952 - SYS1 Genomic Order:  2158
Name:  ? Sobic.003G205501 Secondary Identifier:  ? PAC:37918337
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G205501 0.5kb upstream 0.5kb upstream 15415 true Chr03: 53565831-53581245 Sorghum bicolor
Sobic.003G205501 0.5kb upstream 0.5kb upstream 500 false Chr03: 53565831-53566330 Sorghum bicolor
Sobic.003G205501 0.5kb downstream 0.5kb downstream 15415 true Chr03: 53566331-53581745 Sorghum bicolor
Sobic.003G205501 0.5kb downstream 0.5kb downstream 500 false Chr03: 53581246-53581745 Sorghum bicolor
Sobic.003G205501 1.0kb upstream 1.0kb upstream 15915 true Chr03: 53565331-53581245 Sorghum bicolor
Sobic.003G205501 1.0kb upstream 1.0kb upstream 1000 false Chr03: 53565331-53566330 Sorghum bicolor
Sobic.003G205501 1.0kb downstream 1.0kb downstream 15915 true Chr03: 53566331-53582245 Sorghum bicolor
Sobic.003G205501 1.0kb downstream 1.0kb downstream 1000 false Chr03: 53581246-53582245 Sorghum bicolor
Sobic.003G205501 2.0kb upstream 2.0kb upstream 16915 true Chr03: 53564331-53581245 Sorghum bicolor
Sobic.003G205501 2.0kb upstream 2.0kb upstream 2000 false Chr03: 53564331-53566330 Sorghum bicolor
Sobic.003G205501 2.0kb downstream 2.0kb downstream 16915 true Chr03: 53566331-53583245 Sorghum bicolor
Sobic.003G205501 2.0kb downstream 2.0kb downstream 2000 false Chr03: 53581246-53583245 Sorghum bicolor
Sobic.003G205501 5.0kb upstream 5.0kb upstream 19915 true Chr03: 53561331-53581245 Sorghum bicolor
Sobic.003G205501 5.0kb upstream 5.0kb upstream 5000 false Chr03: 53561331-53566330 Sorghum bicolor
Sobic.003G205501 5.0kb downstream 5.0kb downstream 19915 true Chr03: 53566331-53586245 Sorghum bicolor
Sobic.003G205501 5.0kb downstream 5.0kb downstream 5000 false Chr03: 53581246-53586245 Sorghum bicolor
Sobic.003G205501 10.0kb upstream 10.0kb upstream 24915 true Chr03: 53556331-53581245 Sorghum bicolor
Sobic.003G205501 10.0kb upstream 10.0kb upstream 10000 false Chr03: 53556331-53566330 Sorghum bicolor
Sobic.003G205501 10.0kb downstream 10.0kb downstream 24915 true Chr03: 53566331-53591245 Sorghum bicolor
Sobic.003G205501 10.0kb downstream 10.0kb downstream 10000 false Chr03: 53581246-53591245 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029063 5273 Angiosperm View MSA
122197018 5267 Panicoideae View MSA
124581295 5269 Grass View MSA
121345746 5274 Embryophyte View MSA
123428394 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.336        
cufflinks 1.102       Low
cufflinks 1.662       Low
cufflinks 2.737        
cufflinks 2.192        
cufflinks 5.218       High
cufflinks 2.647        
cufflinks 1.736       Low
cufflinks 3.667       High
cufflinks 3.091        
cufflinks 2.234        
cufflinks 2.721        
cufflinks 3.546       High
cufflinks 3.215        
cufflinks 3.21        
cufflinks 2.29        
cufflinks 2.905        
cufflinks 2.511        
cufflinks 2.629        
cufflinks 3.132        
cufflinks 2.476        
cufflinks 2.335        
cufflinks 2.909        
cufflinks 2.868        
cufflinks 1.711       Low
cufflinks 1.114       Low
cufflinks 2.102        
cufflinks 5.136       High
cufflinks 2.356        
cufflinks 2.909        

0 Strain