Gene : Sobic.003G212500 S. bicolor v3.1.1
Defline:  (1 of 1) K04082 - molecular chaperone HscB (hscB, HSCB, HSC20) Genomic Order:  2229
Name:  ? Sobic.003G212500 Secondary Identifier:  ? PAC:37918777
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G212500 0.5kb upstream 0.5kb upstream 3726 true Chr03: 54711917-54715642 Sorghum bicolor
Sobic.003G212500 0.5kb upstream 0.5kb upstream 500 false Chr03: 54715143-54715642 Sorghum bicolor
Sobic.003G212500 0.5kb downstream 0.5kb downstream 3726 true Chr03: 54711417-54715142 Sorghum bicolor
Sobic.003G212500 0.5kb downstream 0.5kb downstream 500 false Chr03: 54711417-54711916 Sorghum bicolor
Sobic.003G212500 1.0kb upstream 1.0kb upstream 4226 true Chr03: 54711917-54716142 Sorghum bicolor
Sobic.003G212500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 54715143-54716142 Sorghum bicolor
Sobic.003G212500 1.0kb downstream 1.0kb downstream 4226 true Chr03: 54710917-54715142 Sorghum bicolor
Sobic.003G212500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 54710917-54711916 Sorghum bicolor
Sobic.003G212500 2.0kb upstream 2.0kb upstream 5226 true Chr03: 54711917-54717142 Sorghum bicolor
Sobic.003G212500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 54715143-54717142 Sorghum bicolor
Sobic.003G212500 2.0kb downstream 2.0kb downstream 5226 true Chr03: 54709917-54715142 Sorghum bicolor
Sobic.003G212500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 54709917-54711916 Sorghum bicolor
Sobic.003G212500 5.0kb upstream 5.0kb upstream 8226 true Chr03: 54711917-54720142 Sorghum bicolor
Sobic.003G212500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 54715143-54720142 Sorghum bicolor
Sobic.003G212500 5.0kb downstream 5.0kb downstream 8226 true Chr03: 54706917-54715142 Sorghum bicolor
Sobic.003G212500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 54706917-54711916 Sorghum bicolor
Sobic.003G212500 10.0kb upstream 10.0kb upstream 13226 true Chr03: 54711917-54725142 Sorghum bicolor
Sobic.003G212500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 54715143-54725142 Sorghum bicolor
Sobic.003G212500 10.0kb downstream 10.0kb downstream 13226 true Chr03: 54701917-54715142 Sorghum bicolor
Sobic.003G212500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 54701917-54711916 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179544 5267 Panicoideae View MSA
124569010 5269 Grass View MSA
122043255 5273 Angiosperm View MSA
121346465 5274 Embryophyte View MSA
123425339 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.18        
cufflinks 3.812        
cufflinks 3.189        
cufflinks 2.655        
cufflinks 2.107        
cufflinks 6.094       High
cufflinks 2.851        
cufflinks 2.538        
cufflinks 2.809        
cufflinks 2.355        
cufflinks 1.344       Low
cufflinks 1.254       Low
cufflinks 1.875        
cufflinks 1.587       Low
cufflinks 3.3        
cufflinks 4.005       High
cufflinks 2.881        
cufflinks 3.387        
cufflinks 3.515        
cufflinks 2.863        
cufflinks 1.79        
cufflinks 2.007        
cufflinks 1.893        
cufflinks 1.818        
cufflinks 2.366        
cufflinks 2.294        
cufflinks 1.433       Low
cufflinks 11.493     High High
cufflinks 4.602       High
cufflinks 3.575        

0 Strain