Gene : Sobic.003G229600 S. bicolor v3.1.1
Defline:  (1 of 1) 2.1.1.107 - Uroporphyrinogen-III C-methyltransferase / Uroporphyrinogen-III methyltransferase Genomic Order:  2407
Name:  ? Sobic.003G229600 Secondary Identifier:  ? PAC:37917467
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G229600 0.5kb upstream 0.5kb upstream 3843 true Chr03: 56904575-56908417 Sorghum bicolor
Sobic.003G229600 0.5kb upstream 0.5kb upstream 500 false Chr03: 56904575-56905074 Sorghum bicolor
Sobic.003G229600 0.5kb downstream 0.5kb downstream 3843 true Chr03: 56905075-56908917 Sorghum bicolor
Sobic.003G229600 0.5kb downstream 0.5kb downstream 500 false Chr03: 56908418-56908917 Sorghum bicolor
Sobic.003G229600 1.0kb upstream 1.0kb upstream 4343 true Chr03: 56904075-56908417 Sorghum bicolor
Sobic.003G229600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 56904075-56905074 Sorghum bicolor
Sobic.003G229600 1.0kb downstream 1.0kb downstream 4343 true Chr03: 56905075-56909417 Sorghum bicolor
Sobic.003G229600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 56908418-56909417 Sorghum bicolor
Sobic.003G229600 2.0kb upstream 2.0kb upstream 5343 true Chr03: 56903075-56908417 Sorghum bicolor
Sobic.003G229600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 56903075-56905074 Sorghum bicolor
Sobic.003G229600 2.0kb downstream 2.0kb downstream 5343 true Chr03: 56905075-56910417 Sorghum bicolor
Sobic.003G229600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 56908418-56910417 Sorghum bicolor
Sobic.003G229600 5.0kb upstream 5.0kb upstream 8343 true Chr03: 56900075-56908417 Sorghum bicolor
Sobic.003G229600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 56900075-56905074 Sorghum bicolor
Sobic.003G229600 5.0kb downstream 5.0kb downstream 8343 true Chr03: 56905075-56913417 Sorghum bicolor
Sobic.003G229600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 56908418-56913417 Sorghum bicolor
Sobic.003G229600 10.0kb upstream 10.0kb upstream 13343 true Chr03: 56895075-56908417 Sorghum bicolor
Sobic.003G229600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 56895075-56905074 Sorghum bicolor
Sobic.003G229600 10.0kb downstream 10.0kb downstream 13343 true Chr03: 56905075-56918417 Sorghum bicolor
Sobic.003G229600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 56908418-56918417 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182417 5267 Panicoideae View MSA
124577758 5269 Grass View MSA
122045431 5273 Angiosperm View MSA
121347676 5274 Embryophyte View MSA
123426668 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.427     High High
cufflinks 121.274     High High
cufflinks 2.143        
cufflinks 5.214        
cufflinks 2.849        
cufflinks 2.407        
cufflinks 7.528        
cufflinks 26.901     High High
cufflinks 1.701       Low
cufflinks 2.275        
cufflinks 12.179     High  
cufflinks 3.437        
cufflinks 1.753       Low
cufflinks 19.083     High  
cufflinks 2.773        
cufflinks 57.257     High High
cufflinks 6.546        
cufflinks 9.107        
cufflinks 13.928     High  
cufflinks 2.849        
cufflinks 4.358        
cufflinks 3.781        
cufflinks 3.953        
cufflinks 6.069        
cufflinks 151.004     High High
cufflinks 49.458     High High
cufflinks 4.458        
cufflinks 20.036     High  
cufflinks 11.735     High  
cufflinks 2.203        

0 Strain