Gene : Sobic.003G217200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12121//PTHR12121:SF48 - CARBON CATABOLITE REPRESSOR PROTEIN 4 // CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 Genomic Order:  2278
Name:  ? Sobic.003G217200 Secondary Identifier:  ? PAC:37916293
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G217200 0.5kb upstream 0.5kb upstream 7028 true Chr03: 55272705-55279732 Sorghum bicolor
Sobic.003G217200 0.5kb upstream 0.5kb upstream 500 false Chr03: 55279233-55279732 Sorghum bicolor
Sobic.003G217200 0.5kb downstream 0.5kb downstream 7028 true Chr03: 55272205-55279232 Sorghum bicolor
Sobic.003G217200 0.5kb downstream 0.5kb downstream 500 false Chr03: 55272205-55272704 Sorghum bicolor
Sobic.003G217200 1.0kb upstream 1.0kb upstream 7528 true Chr03: 55272705-55280232 Sorghum bicolor
Sobic.003G217200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 55279233-55280232 Sorghum bicolor
Sobic.003G217200 1.0kb downstream 1.0kb downstream 7528 true Chr03: 55271705-55279232 Sorghum bicolor
Sobic.003G217200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 55271705-55272704 Sorghum bicolor
Sobic.003G217200 2.0kb upstream 2.0kb upstream 8528 true Chr03: 55272705-55281232 Sorghum bicolor
Sobic.003G217200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 55279233-55281232 Sorghum bicolor
Sobic.003G217200 2.0kb downstream 2.0kb downstream 8528 true Chr03: 55270705-55279232 Sorghum bicolor
Sobic.003G217200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 55270705-55272704 Sorghum bicolor
Sobic.003G217200 5.0kb upstream 5.0kb upstream 11528 true Chr03: 55272705-55284232 Sorghum bicolor
Sobic.003G217200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 55279233-55284232 Sorghum bicolor
Sobic.003G217200 5.0kb downstream 5.0kb downstream 11528 true Chr03: 55267705-55279232 Sorghum bicolor
Sobic.003G217200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 55267705-55272704 Sorghum bicolor
Sobic.003G217200 10.0kb upstream 10.0kb upstream 16528 true Chr03: 55272705-55289232 Sorghum bicolor
Sobic.003G217200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 55279233-55289232 Sorghum bicolor
Sobic.003G217200 10.0kb downstream 10.0kb downstream 16528 true Chr03: 55262705-55279232 Sorghum bicolor
Sobic.003G217200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 55262705-55272704 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180775 5267 Panicoideae View MSA
124573185 5269 Grass View MSA
122041541 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.937        
cufflinks 3.246       Low
cufflinks 5.207        
cufflinks 4.375        
cufflinks 8.36       High
cufflinks 4.892        
cufflinks 5.777        
cufflinks 3.214       Low
cufflinks 7.246        
cufflinks 7.149        
cufflinks 4.928        
cufflinks 5.906        
cufflinks 6.494        
cufflinks 4.483        
cufflinks 6.519        
cufflinks 4.936        
cufflinks 5.526        
cufflinks 6.931        
cufflinks 3.642       Low
cufflinks 5.26        
cufflinks 11.368       High
cufflinks 5.894        
cufflinks 5.662        
cufflinks 5.521        
cufflinks 4.203        
cufflinks 3.774       Low
cufflinks 4.264        
cufflinks 6.163        
cufflinks 5.724        
cufflinks 7.998       High

0 Strain