Gene : Sobic.003G260400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23240//PTHR23240:SF12 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2740
Name:  ? Sobic.003G260400 Secondary Identifier:  ? PAC:37916320
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G260400 0.5kb upstream 0.5kb upstream 15818 true Chr03: 59823425-59839242 Sorghum bicolor
Sobic.003G260400 0.5kb upstream 0.5kb upstream 500 false Chr03: 59838743-59839242 Sorghum bicolor
Sobic.003G260400 0.5kb downstream 0.5kb downstream 15818 true Chr03: 59822925-59838742 Sorghum bicolor
Sobic.003G260400 0.5kb downstream 0.5kb downstream 500 false Chr03: 59822925-59823424 Sorghum bicolor
Sobic.003G260400 1.0kb upstream 1.0kb upstream 16318 true Chr03: 59823425-59839742 Sorghum bicolor
Sobic.003G260400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 59838743-59839742 Sorghum bicolor
Sobic.003G260400 1.0kb downstream 1.0kb downstream 16318 true Chr03: 59822425-59838742 Sorghum bicolor
Sobic.003G260400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 59822425-59823424 Sorghum bicolor
Sobic.003G260400 2.0kb upstream 2.0kb upstream 17318 true Chr03: 59823425-59840742 Sorghum bicolor
Sobic.003G260400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 59838743-59840742 Sorghum bicolor
Sobic.003G260400 2.0kb downstream 2.0kb downstream 17318 true Chr03: 59821425-59838742 Sorghum bicolor
Sobic.003G260400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 59821425-59823424 Sorghum bicolor
Sobic.003G260400 5.0kb upstream 5.0kb upstream 20318 true Chr03: 59823425-59843742 Sorghum bicolor
Sobic.003G260400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 59838743-59843742 Sorghum bicolor
Sobic.003G260400 5.0kb downstream 5.0kb downstream 20318 true Chr03: 59818425-59838742 Sorghum bicolor
Sobic.003G260400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 59818425-59823424 Sorghum bicolor
Sobic.003G260400 10.0kb upstream 10.0kb upstream 25318 true Chr03: 59823425-59848742 Sorghum bicolor
Sobic.003G260400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 59838743-59848742 Sorghum bicolor
Sobic.003G260400 10.0kb downstream 10.0kb downstream 25318 true Chr03: 59813425-59838742 Sorghum bicolor
Sobic.003G260400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 59813425-59823424 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181784 5267 Panicoideae View MSA
124574730 5269 Grass View MSA
122046861 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.136        
cufflinks 0.055       Low
cufflinks 0.218        
cufflinks 0.336        
cufflinks 0.549       High
cufflinks 0.543       High
cufflinks 0.186        
cufflinks 0.095       Low
cufflinks 0.682       High
cufflinks 0.63       High
cufflinks 0.238        
cufflinks 0.41        
cufflinks 0.444        
cufflinks 0.233        
cufflinks 0.433        
cufflinks 0.115       Low
cufflinks 0.164        
cufflinks 0.166        
cufflinks 0.176        
cufflinks 0.233        
cufflinks 0.997       High
cufflinks 0.206        
cufflinks 0.216        
cufflinks 0.218        
cufflinks 0.175        
cufflinks 0.066       Low
cufflinks 0.352        
cufflinks 0.171        
cufflinks 0.143        
cufflinks 0.5       High

0 Strain