Gene : Sobic.003G263900 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR10994:SF85 - RETICULON-LIKE PROTEIN B14-RELATED Genomic Order:  2777
Name:  ? Sobic.003G263900 Secondary Identifier:  ? PAC:37913864
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G263900 0.5kb upstream 0.5kb upstream 2088 true Chr03: 60113452-60115539 Sorghum bicolor
Sobic.003G263900 0.5kb upstream 0.5kb upstream 500 false Chr03: 60113452-60113951 Sorghum bicolor
Sobic.003G263900 0.5kb downstream 0.5kb downstream 2088 true Chr03: 60113952-60116039 Sorghum bicolor
Sobic.003G263900 0.5kb downstream 0.5kb downstream 500 false Chr03: 60115540-60116039 Sorghum bicolor
Sobic.003G263900 1.0kb upstream 1.0kb upstream 2588 true Chr03: 60112952-60115539 Sorghum bicolor
Sobic.003G263900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 60112952-60113951 Sorghum bicolor
Sobic.003G263900 1.0kb downstream 1.0kb downstream 2588 true Chr03: 60113952-60116539 Sorghum bicolor
Sobic.003G263900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 60115540-60116539 Sorghum bicolor
Sobic.003G263900 2.0kb upstream 2.0kb upstream 3588 true Chr03: 60111952-60115539 Sorghum bicolor
Sobic.003G263900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 60111952-60113951 Sorghum bicolor
Sobic.003G263900 2.0kb downstream 2.0kb downstream 3588 true Chr03: 60113952-60117539 Sorghum bicolor
Sobic.003G263900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 60115540-60117539 Sorghum bicolor
Sobic.003G263900 5.0kb upstream 5.0kb upstream 6588 true Chr03: 60108952-60115539 Sorghum bicolor
Sobic.003G263900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 60108952-60113951 Sorghum bicolor
Sobic.003G263900 5.0kb downstream 5.0kb downstream 6588 true Chr03: 60113952-60120539 Sorghum bicolor
Sobic.003G263900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 60115540-60120539 Sorghum bicolor
Sobic.003G263900 10.0kb upstream 10.0kb upstream 11588 true Chr03: 60103952-60115539 Sorghum bicolor
Sobic.003G263900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 60103952-60113951 Sorghum bicolor
Sobic.003G263900 10.0kb downstream 10.0kb downstream 11588 true Chr03: 60113952-60125539 Sorghum bicolor
Sobic.003G263900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 60115540-60125539 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177016 5267 Panicoideae View MSA
124581377 5269 Grass View MSA
122048457 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.439        
cufflinks 0.027     Low Low
cufflinks 0.009     Low Low
cufflinks 0.023     Low Low
cufflinks 7.809       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.103        
cufflinks 0.615        
cufflinks 0.023     Low Low
cufflinks 0.608        
cufflinks 15.784     High High
cufflinks 4.111        
cufflinks 1.124        
cufflinks 11.031       High
cufflinks 0.208        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.143        
cufflinks 4.507        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.419        
cufflinks 0.974        
cufflinks 1.077        
cufflinks 6.636        
cufflinks 4.543        
cufflinks 0.027     Low Low
cufflinks 0.008     Low Low
cufflinks 5.694        
cufflinks 0.014     Low Low
cufflinks 5.025        
cufflinks 0.123        

0 Strain