Gene : Sobic.003G252100 S. bicolor v3.1.1
Defline:  (1 of 2) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) Genomic Order:  2647
Name:  ? Sobic.003G252100 Secondary Identifier:  ? PAC:37916556
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G252100 0.5kb upstream 0.5kb upstream 18915 true Chr03: 59014345-59033259 Sorghum bicolor
Sobic.003G252100 0.5kb upstream 0.5kb upstream 500 false Chr03: 59014345-59014844 Sorghum bicolor
Sobic.003G252100 0.5kb downstream 0.5kb downstream 18915 true Chr03: 59014845-59033759 Sorghum bicolor
Sobic.003G252100 0.5kb downstream 0.5kb downstream 500 false Chr03: 59033260-59033759 Sorghum bicolor
Sobic.003G252100 1.0kb upstream 1.0kb upstream 19415 true Chr03: 59013845-59033259 Sorghum bicolor
Sobic.003G252100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 59013845-59014844 Sorghum bicolor
Sobic.003G252100 1.0kb downstream 1.0kb downstream 19415 true Chr03: 59014845-59034259 Sorghum bicolor
Sobic.003G252100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 59033260-59034259 Sorghum bicolor
Sobic.003G252100 2.0kb upstream 2.0kb upstream 20415 true Chr03: 59012845-59033259 Sorghum bicolor
Sobic.003G252100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 59012845-59014844 Sorghum bicolor
Sobic.003G252100 2.0kb downstream 2.0kb downstream 20415 true Chr03: 59014845-59035259 Sorghum bicolor
Sobic.003G252100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 59033260-59035259 Sorghum bicolor
Sobic.003G252100 5.0kb upstream 5.0kb upstream 23415 true Chr03: 59009845-59033259 Sorghum bicolor
Sobic.003G252100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 59009845-59014844 Sorghum bicolor
Sobic.003G252100 5.0kb downstream 5.0kb downstream 23415 true Chr03: 59014845-59038259 Sorghum bicolor
Sobic.003G252100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 59033260-59038259 Sorghum bicolor
Sobic.003G252100 10.0kb upstream 10.0kb upstream 28415 true Chr03: 59004845-59033259 Sorghum bicolor
Sobic.003G252100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 59004845-59014844 Sorghum bicolor
Sobic.003G252100 10.0kb downstream 10.0kb downstream 28415 true Chr03: 59014845-59043259 Sorghum bicolor
Sobic.003G252100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 59033260-59043259 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190912 5267 Panicoideae View MSA
124585412 5269 Grass View MSA
122044576 5273 Angiosperm View MSA
121345296 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.331       Low
cufflinks 1.785       Low
cufflinks 2.94        
cufflinks 2.629        
cufflinks 6.534       High
cufflinks 3.526        
cufflinks 3.0        
cufflinks 2.35       Low
cufflinks 5.304       High
cufflinks 4.813        
cufflinks 3.146        
cufflinks 4.161        
cufflinks 4.804        
cufflinks 2.708        
cufflinks 4.357        
cufflinks 2.504        
cufflinks 2.65        
cufflinks 2.779        
cufflinks 3.889        
cufflinks 3.08        
cufflinks 7.301       High
cufflinks 2.634        
cufflinks 2.994        
cufflinks 3.065        
cufflinks 3.601        
cufflinks 2.062       Low
cufflinks 4.676        
cufflinks 3.384        
cufflinks 3.671        
cufflinks 5.186       High

0 Strain