Gene : Sobic.003G267500 S. bicolor v3.1.1
Genomic Order:  2814 Name:  ? Sobic.003G267500
Secondary Identifier:  ? PAC:37918125
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G267500 0.5kb upstream 0.5kb upstream 2339 true Chr03: 60406310-60408648 Sorghum bicolor
Sobic.003G267500 0.5kb upstream 0.5kb upstream 500 false Chr03: 60406310-60406809 Sorghum bicolor
Sobic.003G267500 0.5kb downstream 0.5kb downstream 2339 true Chr03: 60406810-60409148 Sorghum bicolor
Sobic.003G267500 0.5kb downstream 0.5kb downstream 500 false Chr03: 60408649-60409148 Sorghum bicolor
Sobic.003G267500 1.0kb upstream 1.0kb upstream 2839 true Chr03: 60405810-60408648 Sorghum bicolor
Sobic.003G267500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 60405810-60406809 Sorghum bicolor
Sobic.003G267500 1.0kb downstream 1.0kb downstream 2839 true Chr03: 60406810-60409648 Sorghum bicolor
Sobic.003G267500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 60408649-60409648 Sorghum bicolor
Sobic.003G267500 2.0kb upstream 2.0kb upstream 3839 true Chr03: 60404810-60408648 Sorghum bicolor
Sobic.003G267500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 60404810-60406809 Sorghum bicolor
Sobic.003G267500 2.0kb downstream 2.0kb downstream 3839 true Chr03: 60406810-60410648 Sorghum bicolor
Sobic.003G267500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 60408649-60410648 Sorghum bicolor
Sobic.003G267500 5.0kb upstream 5.0kb upstream 6839 true Chr03: 60401810-60408648 Sorghum bicolor
Sobic.003G267500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 60401810-60406809 Sorghum bicolor
Sobic.003G267500 5.0kb downstream 5.0kb downstream 6839 true Chr03: 60406810-60413648 Sorghum bicolor
Sobic.003G267500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 60408649-60413648 Sorghum bicolor
Sobic.003G267500 10.0kb upstream 10.0kb upstream 11839 true Chr03: 60396810-60408648 Sorghum bicolor
Sobic.003G267500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 60396810-60406809 Sorghum bicolor
Sobic.003G267500 10.0kb downstream 10.0kb downstream 11839 true Chr03: 60406810-60418648 Sorghum bicolor
Sobic.003G267500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 60408649-60418648 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026281 5273 Angiosperm View MSA
122182014 5267 Panicoideae View MSA
124580098 5269 Grass View MSA
121348524 5274 Embryophyte View MSA
123380897 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.816       Low
cufflinks 0.77       Low
cufflinks 1.185        
cufflinks 1.239        
cufflinks 3.668        
cufflinks 2.783        
cufflinks 3.371        
cufflinks 2.686        
cufflinks 2.338        
cufflinks 2.215        
cufflinks 1.682        
cufflinks 1.928        
cufflinks 1.855        
cufflinks 1.301        
cufflinks 3.11        
cufflinks 1.092       Low
cufflinks 3.71        
cufflinks 4.059       High
cufflinks 1.812        
cufflinks 3.649        
cufflinks 10.147       High
cufflinks 1.495        
cufflinks 1.973        
cufflinks 2.018        
cufflinks 1.38        
cufflinks 0.866       Low
cufflinks 1.363        
cufflinks 0.356       Low
cufflinks 5.827       High
cufflinks 3.853       High

0 Strain