Gene : Sobic.003G253800 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR16517//PTHR16517:SF35 - TUBBY-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2668
Name:  ? Sobic.003G253800 Secondary Identifier:  ? PAC:37917103
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G253800 0.5kb upstream 0.5kb upstream 5069 true Chr03: 59246050-59251118 Sorghum bicolor
Sobic.003G253800 0.5kb upstream 0.5kb upstream 500 false Chr03: 59250619-59251118 Sorghum bicolor
Sobic.003G253800 0.5kb downstream 0.5kb downstream 5069 true Chr03: 59245550-59250618 Sorghum bicolor
Sobic.003G253800 0.5kb downstream 0.5kb downstream 500 false Chr03: 59245550-59246049 Sorghum bicolor
Sobic.003G253800 1.0kb upstream 1.0kb upstream 5569 true Chr03: 59246050-59251618 Sorghum bicolor
Sobic.003G253800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 59250619-59251618 Sorghum bicolor
Sobic.003G253800 1.0kb downstream 1.0kb downstream 5569 true Chr03: 59245050-59250618 Sorghum bicolor
Sobic.003G253800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 59245050-59246049 Sorghum bicolor
Sobic.003G253800 2.0kb upstream 2.0kb upstream 6569 true Chr03: 59246050-59252618 Sorghum bicolor
Sobic.003G253800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 59250619-59252618 Sorghum bicolor
Sobic.003G253800 2.0kb downstream 2.0kb downstream 6569 true Chr03: 59244050-59250618 Sorghum bicolor
Sobic.003G253800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 59244050-59246049 Sorghum bicolor
Sobic.003G253800 5.0kb upstream 5.0kb upstream 9569 true Chr03: 59246050-59255618 Sorghum bicolor
Sobic.003G253800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 59250619-59255618 Sorghum bicolor
Sobic.003G253800 5.0kb downstream 5.0kb downstream 9569 true Chr03: 59241050-59250618 Sorghum bicolor
Sobic.003G253800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 59241050-59246049 Sorghum bicolor
Sobic.003G253800 10.0kb upstream 10.0kb upstream 14569 true Chr03: 59246050-59260618 Sorghum bicolor
Sobic.003G253800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 59250619-59260618 Sorghum bicolor
Sobic.003G253800 10.0kb downstream 10.0kb downstream 14569 true Chr03: 59236050-59250618 Sorghum bicolor
Sobic.003G253800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 59236050-59246049 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177745 5267 Panicoideae View MSA
124572891 5269 Grass View MSA
122045291 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121310429 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.218        
cufflinks 9.106     High  
cufflinks 17.432     High High
cufflinks 27.456     High High
cufflinks 12.287        
cufflinks 11.601        
cufflinks 5.7       Low
cufflinks 8.725     High  
cufflinks 12.46     High  
cufflinks 14.74     High  
cufflinks 9.065        
cufflinks 8.863        
cufflinks 16.205     High High
cufflinks 7.97        
cufflinks 16.29     High High
cufflinks 13.096     High  
cufflinks 6.377       Low
cufflinks 5.314       Low
cufflinks 12.005     High  
cufflinks 10.025        
cufflinks 8.809        
cufflinks 7.24        
cufflinks 7.581        
cufflinks 7.298        
cufflinks 12.167     High  
cufflinks 9.587     High  
cufflinks 13.081     High  
cufflinks 16.01     High High
cufflinks 5.136       Low
cufflinks 12.963     High  

0 Strain