Gene : Sobic.003G256100 S. bicolor v3.1.1
Defline:  (1 of 1) K16900 - two pore calcium channel protein, plant (TPC1, CCH1) Genomic Order:  2694
Name:  ? Sobic.003G256100 Secondary Identifier:  ? PAC:37913629
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G256100 0.5kb upstream 0.5kb upstream 16703 true Chr03: 59423752-59440454 Sorghum bicolor
Sobic.003G256100 0.5kb upstream 0.5kb upstream 500 false Chr03: 59439955-59440454 Sorghum bicolor
Sobic.003G256100 0.5kb downstream 0.5kb downstream 16703 true Chr03: 59423252-59439954 Sorghum bicolor
Sobic.003G256100 0.5kb downstream 0.5kb downstream 500 false Chr03: 59423252-59423751 Sorghum bicolor
Sobic.003G256100 1.0kb upstream 1.0kb upstream 17203 true Chr03: 59423752-59440954 Sorghum bicolor
Sobic.003G256100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 59439955-59440954 Sorghum bicolor
Sobic.003G256100 1.0kb downstream 1.0kb downstream 17203 true Chr03: 59422752-59439954 Sorghum bicolor
Sobic.003G256100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 59422752-59423751 Sorghum bicolor
Sobic.003G256100 2.0kb upstream 2.0kb upstream 18203 true Chr03: 59423752-59441954 Sorghum bicolor
Sobic.003G256100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 59439955-59441954 Sorghum bicolor
Sobic.003G256100 2.0kb downstream 2.0kb downstream 18203 true Chr03: 59421752-59439954 Sorghum bicolor
Sobic.003G256100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 59421752-59423751 Sorghum bicolor
Sobic.003G256100 5.0kb upstream 5.0kb upstream 21203 true Chr03: 59423752-59444954 Sorghum bicolor
Sobic.003G256100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 59439955-59444954 Sorghum bicolor
Sobic.003G256100 5.0kb downstream 5.0kb downstream 21203 true Chr03: 59418752-59439954 Sorghum bicolor
Sobic.003G256100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 59418752-59423751 Sorghum bicolor
Sobic.003G256100 10.0kb upstream 10.0kb upstream 26203 true Chr03: 59423752-59449954 Sorghum bicolor
Sobic.003G256100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 59439955-59449954 Sorghum bicolor
Sobic.003G256100 10.0kb downstream 10.0kb downstream 26203 true Chr03: 59413752-59439954 Sorghum bicolor
Sobic.003G256100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 59413752-59423751 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187921 5267 Panicoideae View MSA
124584804 5269 Grass View MSA
122042673 5273 Angiosperm View MSA
121347876 5274 Embryophyte View MSA
123380661 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.361       Low
cufflinks 1.321        
cufflinks 2.063        
cufflinks 2.431        
cufflinks 1.713        
cufflinks 2.413        
cufflinks 1.999        
cufflinks 3.782       High
cufflinks 1.479        
cufflinks 1.63        
cufflinks 2.658        
cufflinks 2.268        
cufflinks 1.846        
cufflinks 2.148        
cufflinks 2.828        
cufflinks 2.948        
cufflinks 2.184        
cufflinks 2.612        
cufflinks 3.609       High
cufflinks 2.504        
cufflinks 1.791        
cufflinks 3.289        
cufflinks 2.688        
cufflinks 2.7        
cufflinks 1.607        
cufflinks 1.084       Low
cufflinks 3.537       High
cufflinks 0.266       Low
cufflinks 4.005       High
cufflinks 2.425        

0 Strain