Gene : Sobic.003G256200 S. bicolor v3.1.1
Defline:  (1 of 1) K02968 - small subunit ribosomal protein S20 (RP-S20, rpsT) Genomic Order:  2695
Name:  ? Sobic.003G256200 Secondary Identifier:  ? PAC:37916230
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G256200 0.5kb upstream 0.5kb upstream 2402 true Chr03: 59443284-59445685 Sorghum bicolor
Sobic.003G256200 0.5kb upstream 0.5kb upstream 500 false Chr03: 59443284-59443783 Sorghum bicolor
Sobic.003G256200 0.5kb downstream 0.5kb downstream 2402 true Chr03: 59443784-59446185 Sorghum bicolor
Sobic.003G256200 0.5kb downstream 0.5kb downstream 500 false Chr03: 59445686-59446185 Sorghum bicolor
Sobic.003G256200 1.0kb upstream 1.0kb upstream 2902 true Chr03: 59442784-59445685 Sorghum bicolor
Sobic.003G256200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 59442784-59443783 Sorghum bicolor
Sobic.003G256200 1.0kb downstream 1.0kb downstream 2902 true Chr03: 59443784-59446685 Sorghum bicolor
Sobic.003G256200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 59445686-59446685 Sorghum bicolor
Sobic.003G256200 2.0kb upstream 2.0kb upstream 3902 true Chr03: 59441784-59445685 Sorghum bicolor
Sobic.003G256200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 59441784-59443783 Sorghum bicolor
Sobic.003G256200 2.0kb downstream 2.0kb downstream 3902 true Chr03: 59443784-59447685 Sorghum bicolor
Sobic.003G256200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 59445686-59447685 Sorghum bicolor
Sobic.003G256200 5.0kb upstream 5.0kb upstream 6902 true Chr03: 59438784-59445685 Sorghum bicolor
Sobic.003G256200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 59438784-59443783 Sorghum bicolor
Sobic.003G256200 5.0kb downstream 5.0kb downstream 6902 true Chr03: 59443784-59450685 Sorghum bicolor
Sobic.003G256200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 59445686-59450685 Sorghum bicolor
Sobic.003G256200 10.0kb upstream 10.0kb upstream 11902 true Chr03: 59433784-59445685 Sorghum bicolor
Sobic.003G256200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 59433784-59443783 Sorghum bicolor
Sobic.003G256200 10.0kb downstream 10.0kb downstream 11902 true Chr03: 59443784-59455685 Sorghum bicolor
Sobic.003G256200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 59445686-59455685 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027102 5273 Angiosperm View MSA
122189200 5267 Panicoideae View MSA
124572146 5269 Grass View MSA
121345926 5274 Embryophyte View MSA
123425445 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.202        
cufflinks 59.047     High High
cufflinks 47.575     High  
cufflinks 21.771     High  
cufflinks 8.38        
cufflinks 21.568     High  
cufflinks 105.938     High High
cufflinks 147.711     High High
cufflinks 5.538        
cufflinks 5.114        
cufflinks 2.145       Low
cufflinks 2.378       Low
cufflinks 3.891        
cufflinks 2.169       Low
cufflinks 11.344        
cufflinks 38.746     High  
cufflinks 92.908     High High
cufflinks 118.32     High High
cufflinks 80.277     High High
cufflinks 36.874     High  
cufflinks 7.517        
cufflinks 2.882        
cufflinks 2.424       Low
cufflinks 2.877        
cufflinks 25.446     High  
cufflinks 47.979     High  
cufflinks 2.283       Low
cufflinks 5.169        
cufflinks 224.578     High High
cufflinks 14.295     High  

0 Strain