Gene : Sobic.003G258900 S. bicolor v3.1.1
Defline:  (1 of 2) K12827 - splicing factor 3A subunit 3 (SF3A3, SAP61, PRP9) Genomic Order:  2724
Name:  ? Sobic.003G258900 Secondary Identifier:  ? PAC:37917575
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G258900 0.5kb upstream 0.5kb upstream 9105 true Chr03: 59691954-59701058 Sorghum bicolor
Sobic.003G258900 0.5kb upstream 0.5kb upstream 500 false Chr03: 59691954-59692453 Sorghum bicolor
Sobic.003G258900 0.5kb downstream 0.5kb downstream 9105 true Chr03: 59692454-59701558 Sorghum bicolor
Sobic.003G258900 0.5kb downstream 0.5kb downstream 500 false Chr03: 59701059-59701558 Sorghum bicolor
Sobic.003G258900 1.0kb upstream 1.0kb upstream 9605 true Chr03: 59691454-59701058 Sorghum bicolor
Sobic.003G258900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 59691454-59692453 Sorghum bicolor
Sobic.003G258900 1.0kb downstream 1.0kb downstream 9605 true Chr03: 59692454-59702058 Sorghum bicolor
Sobic.003G258900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 59701059-59702058 Sorghum bicolor
Sobic.003G258900 2.0kb upstream 2.0kb upstream 10605 true Chr03: 59690454-59701058 Sorghum bicolor
Sobic.003G258900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 59690454-59692453 Sorghum bicolor
Sobic.003G258900 2.0kb downstream 2.0kb downstream 10605 true Chr03: 59692454-59703058 Sorghum bicolor
Sobic.003G258900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 59701059-59703058 Sorghum bicolor
Sobic.003G258900 5.0kb upstream 5.0kb upstream 13605 true Chr03: 59687454-59701058 Sorghum bicolor
Sobic.003G258900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 59687454-59692453 Sorghum bicolor
Sobic.003G258900 5.0kb downstream 5.0kb downstream 13605 true Chr03: 59692454-59706058 Sorghum bicolor
Sobic.003G258900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 59701059-59706058 Sorghum bicolor
Sobic.003G258900 10.0kb upstream 10.0kb upstream 18605 true Chr03: 59682454-59701058 Sorghum bicolor
Sobic.003G258900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 59682454-59692453 Sorghum bicolor
Sobic.003G258900 10.0kb downstream 10.0kb downstream 18605 true Chr03: 59692454-59711058 Sorghum bicolor
Sobic.003G258900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 59701059-59711058 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179392 5267 Panicoideae View MSA
124572098 5269 Grass View MSA
122042756 5273 Angiosperm View MSA
123429134 5275 Viridiplantae View MSA
121345552 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.608     High  
cufflinks 1.189       Low
cufflinks 6.576        
cufflinks 13.261     High  
cufflinks 14.466     High  
cufflinks 13.341        
cufflinks 7.605        
cufflinks 1.462       Low
cufflinks 16.132     High  
cufflinks 15.005     High  
cufflinks 8.256        
cufflinks 8.856        
cufflinks 11.901     High  
cufflinks 7.676        
cufflinks 9.585        
cufflinks 4.278        
cufflinks 8.5        
cufflinks 10.016        
cufflinks 6.952        
cufflinks 10.704        
cufflinks 21.012     High High
cufflinks 10.275        
cufflinks 9.724        
cufflinks 8.85        
cufflinks 2.539       Low
cufflinks 0.839       Low
cufflinks 9.501        
cufflinks 20.129     High High
cufflinks 4.719        
cufflinks 11.833        

0 Strain