Gene : Sobic.003G273600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11909//PTHR11909:SF154 - CASEIN KINASE-RELATED // PROTEIN KINASE FAMILY PROTEIN Genomic Order:  2877
Name:  ? Sobic.003G273600 Secondary Identifier:  ? PAC:37915048
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G273600 0.5kb upstream 0.5kb upstream 5805 true Chr03: 60987816-60993620 Sorghum bicolor
Sobic.003G273600 0.5kb upstream 0.5kb upstream 500 false Chr03: 60987816-60988315 Sorghum bicolor
Sobic.003G273600 0.5kb downstream 0.5kb downstream 5805 true Chr03: 60988316-60994120 Sorghum bicolor
Sobic.003G273600 0.5kb downstream 0.5kb downstream 500 false Chr03: 60993621-60994120 Sorghum bicolor
Sobic.003G273600 1.0kb upstream 1.0kb upstream 6305 true Chr03: 60987316-60993620 Sorghum bicolor
Sobic.003G273600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 60987316-60988315 Sorghum bicolor
Sobic.003G273600 1.0kb downstream 1.0kb downstream 6305 true Chr03: 60988316-60994620 Sorghum bicolor
Sobic.003G273600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 60993621-60994620 Sorghum bicolor
Sobic.003G273600 2.0kb upstream 2.0kb upstream 7305 true Chr03: 60986316-60993620 Sorghum bicolor
Sobic.003G273600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 60986316-60988315 Sorghum bicolor
Sobic.003G273600 2.0kb downstream 2.0kb downstream 7305 true Chr03: 60988316-60995620 Sorghum bicolor
Sobic.003G273600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 60993621-60995620 Sorghum bicolor
Sobic.003G273600 5.0kb upstream 5.0kb upstream 10305 true Chr03: 60983316-60993620 Sorghum bicolor
Sobic.003G273600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 60983316-60988315 Sorghum bicolor
Sobic.003G273600 5.0kb downstream 5.0kb downstream 10305 true Chr03: 60988316-60998620 Sorghum bicolor
Sobic.003G273600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 60993621-60998620 Sorghum bicolor
Sobic.003G273600 10.0kb upstream 10.0kb upstream 15305 true Chr03: 60978316-60993620 Sorghum bicolor
Sobic.003G273600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 60978316-60988315 Sorghum bicolor
Sobic.003G273600 10.0kb downstream 10.0kb downstream 15305 true Chr03: 60988316-61003620 Sorghum bicolor
Sobic.003G273600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 60993621-61003620 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198141 5267 Panicoideae View MSA
124576167 5269 Grass View MSA
122046132 5273 Angiosperm View MSA
121344009 5274 Embryophyte View MSA
123427595 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.314     High  
cufflinks 17.492     High Low
cufflinks 28.111     High  
cufflinks 31.37     High  
cufflinks 27.829     High  
cufflinks 27.031     High  
cufflinks 29.912     High  
cufflinks 21.189     High Low
cufflinks 32.626     High  
cufflinks 34.914     High  
cufflinks 51.657     High High
cufflinks 50.22     High High
cufflinks 31.163     High  
cufflinks 61.052     High High
cufflinks 32.044     High  
cufflinks 26.46     High  
cufflinks 34.365     High  
cufflinks 31.767     High  
cufflinks 16.815     High Low
cufflinks 35.283     High  
cufflinks 34.387     High  
cufflinks 42.089     High  
cufflinks 56.371     High High
cufflinks 46.662     High High
cufflinks 23.876     High  
cufflinks 16.209     High Low
cufflinks 51.406     High High
cufflinks 9.825     High Low
cufflinks 28.759     High  
cufflinks 32.653     High  

0 Strain