Gene : Sobic.003G276500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11743//PTHR11743:SF30 - VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL // SUBFAMILY NOT NAMED Genomic Order:  2906
Name:  ? Sobic.003G276500 Secondary Identifier:  ? PAC:37917322
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G276500 0.5kb upstream 0.5kb upstream 3547 true Chr03: 61283373-61286919 Sorghum bicolor
Sobic.003G276500 0.5kb upstream 0.5kb upstream 500 false Chr03: 61286420-61286919 Sorghum bicolor
Sobic.003G276500 0.5kb downstream 0.5kb downstream 3547 true Chr03: 61282873-61286419 Sorghum bicolor
Sobic.003G276500 0.5kb downstream 0.5kb downstream 500 false Chr03: 61282873-61283372 Sorghum bicolor
Sobic.003G276500 1.0kb upstream 1.0kb upstream 4047 true Chr03: 61283373-61287419 Sorghum bicolor
Sobic.003G276500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 61286420-61287419 Sorghum bicolor
Sobic.003G276500 1.0kb downstream 1.0kb downstream 4047 true Chr03: 61282373-61286419 Sorghum bicolor
Sobic.003G276500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 61282373-61283372 Sorghum bicolor
Sobic.003G276500 2.0kb upstream 2.0kb upstream 5047 true Chr03: 61283373-61288419 Sorghum bicolor
Sobic.003G276500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 61286420-61288419 Sorghum bicolor
Sobic.003G276500 2.0kb downstream 2.0kb downstream 5047 true Chr03: 61281373-61286419 Sorghum bicolor
Sobic.003G276500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 61281373-61283372 Sorghum bicolor
Sobic.003G276500 5.0kb upstream 5.0kb upstream 8047 true Chr03: 61283373-61291419 Sorghum bicolor
Sobic.003G276500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 61286420-61291419 Sorghum bicolor
Sobic.003G276500 5.0kb downstream 5.0kb downstream 8047 true Chr03: 61278373-61286419 Sorghum bicolor
Sobic.003G276500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 61278373-61283372 Sorghum bicolor
Sobic.003G276500 10.0kb upstream 10.0kb upstream 13047 true Chr03: 61283373-61296419 Sorghum bicolor
Sobic.003G276500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 61286420-61296419 Sorghum bicolor
Sobic.003G276500 10.0kb downstream 10.0kb downstream 13047 true Chr03: 61273373-61286419 Sorghum bicolor
Sobic.003G276500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 61273373-61283372 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180753 5267 Panicoideae View MSA
124577529 5269 Grass View MSA
122042398 5273 Angiosperm View MSA
121349603 5274 Embryophyte View MSA
123426124 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.605     High High
cufflinks 0.178       Low
cufflinks 0.716        
cufflinks 2.179        
cufflinks 5.382        
cufflinks 0.558       Low
cufflinks 3.154        
cufflinks 0.42       Low
cufflinks 2.936        
cufflinks 5.661        
cufflinks 5.739        
cufflinks 4.748        
cufflinks 1.079        
cufflinks 5.581        
cufflinks 3.135        
cufflinks 0.604       Low
cufflinks 3.546        
cufflinks 4.253        
cufflinks 0.197       Low
cufflinks 2.805        
cufflinks 19.924     High High
cufflinks 6.634        
cufflinks 7.639        
cufflinks 8.911        
cufflinks 0.193       Low
cufflinks 0.181       Low
cufflinks 3.859        
cufflinks 1.71        
cufflinks 1.527        
cufflinks 8.83        

0 Strain