Gene : Sobic.003G279900 S. bicolor v3.1.1
Defline:  (1 of 1) 2.3.1.129 - Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase / UDP-N-acetylglucosamine acyltransferase Genomic Order:  2944
Name:  ? Sobic.003G279900 Secondary Identifier:  ? PAC:37918149
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor NAGLIPASYN-PWY Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G279900 0.5kb upstream 0.5kb upstream 6233 true Chr03: 61524328-61530560 Sorghum bicolor
Sobic.003G279900 0.5kb upstream 0.5kb upstream 500 false Chr03: 61524328-61524827 Sorghum bicolor
Sobic.003G279900 0.5kb downstream 0.5kb downstream 6233 true Chr03: 61524828-61531060 Sorghum bicolor
Sobic.003G279900 0.5kb downstream 0.5kb downstream 500 false Chr03: 61530561-61531060 Sorghum bicolor
Sobic.003G279900 1.0kb upstream 1.0kb upstream 6733 true Chr03: 61523828-61530560 Sorghum bicolor
Sobic.003G279900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 61523828-61524827 Sorghum bicolor
Sobic.003G279900 1.0kb downstream 1.0kb downstream 6733 true Chr03: 61524828-61531560 Sorghum bicolor
Sobic.003G279900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 61530561-61531560 Sorghum bicolor
Sobic.003G279900 2.0kb upstream 2.0kb upstream 7733 true Chr03: 61522828-61530560 Sorghum bicolor
Sobic.003G279900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 61522828-61524827 Sorghum bicolor
Sobic.003G279900 2.0kb downstream 2.0kb downstream 7733 true Chr03: 61524828-61532560 Sorghum bicolor
Sobic.003G279900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 61530561-61532560 Sorghum bicolor
Sobic.003G279900 5.0kb upstream 5.0kb upstream 10733 true Chr03: 61519828-61530560 Sorghum bicolor
Sobic.003G279900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 61519828-61524827 Sorghum bicolor
Sobic.003G279900 5.0kb downstream 5.0kb downstream 10733 true Chr03: 61524828-61535560 Sorghum bicolor
Sobic.003G279900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 61530561-61535560 Sorghum bicolor
Sobic.003G279900 10.0kb upstream 10.0kb upstream 15733 true Chr03: 61514828-61530560 Sorghum bicolor
Sobic.003G279900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 61514828-61524827 Sorghum bicolor
Sobic.003G279900 10.0kb downstream 10.0kb downstream 15733 true Chr03: 61524828-61540560 Sorghum bicolor
Sobic.003G279900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 61530561-61540560 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041125 5273 Angiosperm View MSA
122185557 5267 Panicoideae View MSA
124582641 5269 Grass View MSA
121347426 5274 Embryophyte View MSA
123380545 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.108        
cufflinks 0.109       Low
cufflinks 0.331        
cufflinks 1.003        
cufflinks 1.085        
cufflinks 1.485       High
cufflinks 0.422        
cufflinks 0.129       Low
cufflinks 1.555       High
cufflinks 1.624       High
cufflinks 0.518        
cufflinks 0.785        
cufflinks 1.169        
cufflinks 0.572        
cufflinks 0.821        
cufflinks 0.254       Low
cufflinks 0.381        
cufflinks 0.394        
cufflinks 0.211       Low
cufflinks 0.548        
cufflinks 0.788        
cufflinks 0.662        
cufflinks 0.578        
cufflinks 0.596        
cufflinks 0.307        
cufflinks 0.097       Low
cufflinks 0.917        
cufflinks 0.585        
cufflinks 0.326        
cufflinks 1.083        

0 Strain