Gene : Sobic.003G280100 S. bicolor v3.1.1
Genomic Order:  2946 Name:  ? Sobic.003G280100
Secondary Identifier:  ? PAC:37918619
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G280100 0.5kb upstream 0.5kb upstream 1211 true Chr03: 61543556-61544766 Sorghum bicolor
Sobic.003G280100 0.5kb upstream 0.5kb upstream 500 false Chr03: 61543556-61544055 Sorghum bicolor
Sobic.003G280100 0.5kb downstream 0.5kb downstream 1211 true Chr03: 61544056-61545266 Sorghum bicolor
Sobic.003G280100 0.5kb downstream 0.5kb downstream 500 false Chr03: 61544767-61545266 Sorghum bicolor
Sobic.003G280100 1.0kb upstream 1.0kb upstream 1711 true Chr03: 61543056-61544766 Sorghum bicolor
Sobic.003G280100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 61543056-61544055 Sorghum bicolor
Sobic.003G280100 1.0kb downstream 1.0kb downstream 1711 true Chr03: 61544056-61545766 Sorghum bicolor
Sobic.003G280100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 61544767-61545766 Sorghum bicolor
Sobic.003G280100 2.0kb upstream 2.0kb upstream 2711 true Chr03: 61542056-61544766 Sorghum bicolor
Sobic.003G280100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 61542056-61544055 Sorghum bicolor
Sobic.003G280100 2.0kb downstream 2.0kb downstream 2711 true Chr03: 61544056-61546766 Sorghum bicolor
Sobic.003G280100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 61544767-61546766 Sorghum bicolor
Sobic.003G280100 5.0kb upstream 5.0kb upstream 5711 true Chr03: 61539056-61544766 Sorghum bicolor
Sobic.003G280100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 61539056-61544055 Sorghum bicolor
Sobic.003G280100 5.0kb downstream 5.0kb downstream 5711 true Chr03: 61544056-61549766 Sorghum bicolor
Sobic.003G280100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 61544767-61549766 Sorghum bicolor
Sobic.003G280100 10.0kb upstream 10.0kb upstream 10711 true Chr03: 61534056-61544766 Sorghum bicolor
Sobic.003G280100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 61534056-61544055 Sorghum bicolor
Sobic.003G280100 10.0kb downstream 10.0kb downstream 10711 true Chr03: 61544056-61554766 Sorghum bicolor
Sobic.003G280100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 61544767-61554766 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121995431 5273 Angiosperm View MSA
122175718 5267 Panicoideae View MSA
124588289 5269 Grass View MSA
121265623 5274 Embryophyte View MSA
123304001 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.88       High
cufflinks 0.916        
cufflinks 1.869       High
cufflinks 0.248        
cufflinks 0.019     Low Low
cufflinks 0.362        
cufflinks 0.223        
cufflinks 0.232        
cufflinks 0.05     Low Low
cufflinks 0.017     Low Low
cufflinks 0.362        
cufflinks 0.219        
cufflinks 0.017     Low Low
cufflinks 0.61        
cufflinks 0.167        
cufflinks 0.979        
cufflinks 0.462        
cufflinks 0.3        
cufflinks 0.502        
cufflinks 0.162        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.586        
cufflinks 1.322       High
cufflinks 0.492        
cufflinks 0.575        
cufflinks 0.504        
cufflinks 1.3       High
cufflinks 3.357       High
cufflinks 0.047     Low Low
cufflinks 0.455        

0 Strain